Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vcpip1Q8CDG3 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vcpip1Q8CDG3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Vcpip1Q8CDG3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Vcpip1Q8CDG3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.43
Vcpip1Q8CDG3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
Vcpip1Q8CDG3 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.95■■□□□ 1.42
Vcpip1Q8CDG3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.95■■□□□ 1.42
Vcpip1Q8CDG3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Vcpip1Q8CDG3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vcpip1Q8CDG3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vcpip1Q8CDG3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vcpip1Q8CDG3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Vcpip1Q8CDG3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Vcpip1Q8CDG3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vcpip1Q8CDG3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Vcpip1Q8CDG3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.93■■□□□ 1.42
Vcpip1Q8CDG3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.93■■□□□ 1.42
Vcpip1Q8CDG3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Vcpip1Q8CDG3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vcpip1Q8CDG3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Vcpip1Q8CDG3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.92■■□□□ 1.42
Vcpip1Q8CDG3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Vcpip1Q8CDG3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vcpip1Q8CDG3 Gm4799-201ENSMUST00000095396 657 ntBASIC23.91■■□□□ 1.42
Vcpip1Q8CDG3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
Vcpip1Q8CDG3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vcpip1Q8CDG3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Vcpip1Q8CDG3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Vcpip1Q8CDG3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Vcpip1Q8CDG3 Gm11599-201ENSMUST00000118720 878 ntBASIC23.89■■□□□ 1.41
Vcpip1Q8CDG3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Vcpip1Q8CDG3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Vcpip1Q8CDG3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Vcpip1Q8CDG3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Vcpip1Q8CDG3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vcpip1Q8CDG3 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Vcpip1Q8CDG3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.88■■□□□ 1.41
Vcpip1Q8CDG3 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC23.88■■□□□ 1.41
Vcpip1Q8CDG3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vcpip1Q8CDG3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.87■■□□□ 1.41
Vcpip1Q8CDG3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vcpip1Q8CDG3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vcpip1Q8CDG3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Vcpip1Q8CDG3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vcpip1Q8CDG3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vcpip1Q8CDG3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Vcpip1Q8CDG3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vcpip1Q8CDG3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vcpip1Q8CDG3 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vcpip1Q8CDG3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vcpip1Q8CDG3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Vcpip1Q8CDG3 Gm9812-201ENSMUST00000061934 968 ntBASIC23.84■■□□□ 1.41
Vcpip1Q8CDG3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vcpip1Q8CDG3 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.83■■□□□ 1.41
Vcpip1Q8CDG3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Vcpip1Q8CDG3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.83■■□□□ 1.41
Vcpip1Q8CDG3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Vcpip1Q8CDG3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Vcpip1Q8CDG3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vcpip1Q8CDG3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vcpip1Q8CDG3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Vcpip1Q8CDG3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.81■■□□□ 1.4
Vcpip1Q8CDG3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.81■■□□□ 1.4
Vcpip1Q8CDG3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vcpip1Q8CDG3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vcpip1Q8CDG3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.8■■□□□ 1.4
Vcpip1Q8CDG3 Mir3960-201ENSMUST00000198213 73 ntBASIC23.8■■□□□ 1.4
Vcpip1Q8CDG3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.8■■□□□ 1.4
Vcpip1Q8CDG3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Vcpip1Q8CDG3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vcpip1Q8CDG3 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.79■■□□□ 1.4
Vcpip1Q8CDG3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.79■■□□□ 1.4
Vcpip1Q8CDG3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vcpip1Q8CDG3 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.79■■□□□ 1.4
Vcpip1Q8CDG3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 Mir6538-201ENSMUST00000183713 110 ntBASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Vcpip1Q8CDG3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vcpip1Q8CDG3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vcpip1Q8CDG3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Vcpip1Q8CDG3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vcpip1Q8CDG3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcpip1Q8CDG3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Vcpip1Q8CDG3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Vcpip1Q8CDG3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Vcpip1Q8CDG3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.75■■□□□ 1.39
Vcpip1Q8CDG3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vcpip1Q8CDG3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vcpip1Q8CDG3 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms