Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Pabpn1Q8CCS6 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC36.41■■■■□ 3.42
Pabpn1Q8CCS6 Spcs1-207ENSMUST00000228767 1008 ntBASIC36.41■■■■□ 3.42
Pabpn1Q8CCS6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC36.41■■■■□ 3.42
Pabpn1Q8CCS6 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC36.4■■■■□ 3.42
Pabpn1Q8CCS6 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC36.39■■■■□ 3.42
Pabpn1Q8CCS6 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Pabpn1Q8CCS6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Pabpn1Q8CCS6 Gm45417-201ENSMUST00000209533 758 ntBASIC36.38■■■■□ 3.41
Pabpn1Q8CCS6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 Gm12922-201ENSMUST00000120626 809 ntBASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC36.37■■■■□ 3.41
Pabpn1Q8CCS6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Pabpn1Q8CCS6 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC36.35■■■■□ 3.41
Pabpn1Q8CCS6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Pabpn1Q8CCS6 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC36.35■■■■□ 3.41
Pabpn1Q8CCS6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC36.35■■■■□ 3.41
Pabpn1Q8CCS6 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Pabpn1Q8CCS6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Pabpn1Q8CCS6 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Pabpn1Q8CCS6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC36.34■■■■□ 3.41
Pabpn1Q8CCS6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Pabpn1Q8CCS6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC36.34■■■■□ 3.41
Pabpn1Q8CCS6 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC36.33■■■■□ 3.41
Pabpn1Q8CCS6 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Pabpn1Q8CCS6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC36.33■■■■□ 3.41
Pabpn1Q8CCS6 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Pabpn1Q8CCS6 Gm14121-201ENSMUST00000121441 1380 ntBASIC36.32■■■■□ 3.4
Pabpn1Q8CCS6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC36.31■■■■□ 3.4
Pabpn1Q8CCS6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC36.3■■■■□ 3.4
Pabpn1Q8CCS6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC36.3■■■■□ 3.4
Pabpn1Q8CCS6 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Pabpn1Q8CCS6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Pabpn1Q8CCS6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Pabpn1Q8CCS6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Pabpn1Q8CCS6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Pabpn1Q8CCS6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC36.27■■■■□ 3.4
Pabpn1Q8CCS6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC36.27■■■■□ 3.4
Pabpn1Q8CCS6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC36.27■■■■□ 3.4
Pabpn1Q8CCS6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC36.26■■■■□ 3.4
Pabpn1Q8CCS6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC36.25■■■■□ 3.39
Pabpn1Q8CCS6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC36.25■■■■□ 3.39
Pabpn1Q8CCS6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC36.24■■■■□ 3.39
Pabpn1Q8CCS6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC36.23■■■■□ 3.39
Pabpn1Q8CCS6 Gm16464-201ENSMUST00000117815 1095 ntBASIC36.21■■■■□ 3.39
Pabpn1Q8CCS6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC36.21■■■■□ 3.39
Pabpn1Q8CCS6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC36.21■■■■□ 3.39
Pabpn1Q8CCS6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC36.2■■■■□ 3.39
Pabpn1Q8CCS6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC36.19■■■■□ 3.38
Pabpn1Q8CCS6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC36.19■■■■□ 3.38
Pabpn1Q8CCS6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Pabpn1Q8CCS6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC36.19■■■■□ 3.38
Pabpn1Q8CCS6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC36.18■■■■□ 3.38
Pabpn1Q8CCS6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Pabpn1Q8CCS6 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC36.18■■■■□ 3.38
Pabpn1Q8CCS6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC36.18■■■■□ 3.38
Pabpn1Q8CCS6 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC36.18■■■■□ 3.38
Pabpn1Q8CCS6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC36.18■■■■□ 3.38
Pabpn1Q8CCS6 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC36.15■■■■□ 3.38
Pabpn1Q8CCS6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC36.14■■■■□ 3.38
Pabpn1Q8CCS6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC36.14■■■■□ 3.38
Pabpn1Q8CCS6 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC36.14■■■■□ 3.38
Pabpn1Q8CCS6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC36.13■■■■□ 3.37
Pabpn1Q8CCS6 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC36.13■■■■□ 3.37
Pabpn1Q8CCS6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Pabpn1Q8CCS6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC36.13■■■■□ 3.37
Pabpn1Q8CCS6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
Pabpn1Q8CCS6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC36.12■■■■□ 3.37
Pabpn1Q8CCS6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC36.12■■■■□ 3.37
Pabpn1Q8CCS6 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC36.11■■■■□ 3.37
Pabpn1Q8CCS6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC36.11■■■■□ 3.37
Pabpn1Q8CCS6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC36.1■■■■□ 3.37
Pabpn1Q8CCS6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC36.1■■■■□ 3.37
Pabpn1Q8CCS6 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC36.09■■■■□ 3.37
Pabpn1Q8CCS6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC36.09■■■■□ 3.37
Pabpn1Q8CCS6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC36.08■■■■□ 3.37
Pabpn1Q8CCS6 AC164629.5-201ENSMUST00000220387 632 ntBASIC36.08■■■■□ 3.37
Pabpn1Q8CCS6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC36.08■■■■□ 3.37
Pabpn1Q8CCS6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.37
Pabpn1Q8CCS6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC36.07■■■■□ 3.36
Pabpn1Q8CCS6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC36.07■■■■□ 3.36
Pabpn1Q8CCS6 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC36.06■■■■□ 3.36
Pabpn1Q8CCS6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC36.05■■■■□ 3.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms