Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.06■□□□□ 0.8
Lysmd4Q8CC84 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd4Q8CC84 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd4Q8CC84 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd4Q8CC84 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd4Q8CC84 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd4Q8CC84 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Lysmd4Q8CC84 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd4Q8CC84 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Lysmd4Q8CC84 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd4Q8CC84 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Lysmd4Q8CC84 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd4Q8CC84 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Lysmd4Q8CC84 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd4Q8CC84 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Lysmd4Q8CC84 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Lysmd4Q8CC84 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd4Q8CC84 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd4Q8CC84 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd4Q8CC84 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Lysmd4Q8CC84 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd4Q8CC84 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Lysmd4Q8CC84 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Lysmd4Q8CC84 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Lysmd4Q8CC84 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Lysmd4Q8CC84 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Lysmd4Q8CC84 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Lysmd4Q8CC84 Gm6277-202ENSMUST00000224036 2779 ntBASIC20■□□□□ 0.79
Lysmd4Q8CC84 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd4Q8CC84 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Lysmd4Q8CC84 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Lysmd4Q8CC84 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Lysmd4Q8CC84 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd4Q8CC84 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd4Q8CC84 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.99■□□□□ 0.79
Lysmd4Q8CC84 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Lysmd4Q8CC84 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd4Q8CC84 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.98■□□□□ 0.79
Lysmd4Q8CC84 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Lysmd4Q8CC84 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Lysmd4Q8CC84 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd4Q8CC84 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.97■□□□□ 0.79
Lysmd4Q8CC84 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd4Q8CC84 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd4Q8CC84 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd4Q8CC84 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Lysmd4Q8CC84 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd4Q8CC84 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd4Q8CC84 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Lysmd4Q8CC84 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.96■□□□□ 0.79
Lysmd4Q8CC84 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Lysmd4Q8CC84 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd4Q8CC84 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Lysmd4Q8CC84 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Lysmd4Q8CC84 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd4Q8CC84 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd4Q8CC84 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd4Q8CC84 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.94■□□□□ 0.78
Lysmd4Q8CC84 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Lysmd4Q8CC84 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Lysmd4Q8CC84 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Nkain2-201ENSMUST00000092602 558 ntBASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Lysmd4Q8CC84 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Lysmd4Q8CC84 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd4Q8CC84 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd4Q8CC84 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Lysmd4Q8CC84 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Lysmd4Q8CC84 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd4Q8CC84 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Lysmd4Q8CC84 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Lysmd4Q8CC84 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.87■□□□□ 0.77
Lysmd4Q8CC84 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Lysmd4Q8CC84 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.87■□□□□ 0.77
Lysmd4Q8CC84 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd4Q8CC84 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd4Q8CC84 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.86■□□□□ 0.77
Lysmd4Q8CC84 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd4Q8CC84 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Lysmd4Q8CC84 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Lysmd4Q8CC84 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Lysmd4Q8CC84 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms