Protein–RNA interactions for Protein: Q8C7E9

Cstf2t, Cleavage stimulation factor subunit 2 tau variant, mousemouse

Known RBP Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf2tQ8C7E9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cstf2tQ8C7E9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.86■■□□□ 1.25
Cstf2tQ8C7E9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Cstf2tQ8C7E9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Cstf2tQ8C7E9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Cstf2tQ8C7E9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Cstf2tQ8C7E9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Cstf2tQ8C7E9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.85■■□□□ 1.25
Cstf2tQ8C7E9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cstf2tQ8C7E9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.84■■□□□ 1.25
Cstf2tQ8C7E9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Cstf2tQ8C7E9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Cstf2tQ8C7E9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cstf2tQ8C7E9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.24
Cstf2tQ8C7E9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
Cstf2tQ8C7E9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.82■■□□□ 1.24
Cstf2tQ8C7E9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf2tQ8C7E9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf2tQ8C7E9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf2tQ8C7E9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf2tQ8C7E9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Cstf2tQ8C7E9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cstf2tQ8C7E9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.8■■□□□ 1.24
Cstf2tQ8C7E9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Cstf2tQ8C7E9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf2tQ8C7E9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf2tQ8C7E9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf2tQ8C7E9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cstf2tQ8C7E9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.78■■□□□ 1.24
Cstf2tQ8C7E9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf2tQ8C7E9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf2tQ8C7E9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf2tQ8C7E9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf2tQ8C7E9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cstf2tQ8C7E9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Cstf2tQ8C7E9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cstf2tQ8C7E9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cstf2tQ8C7E9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cstf2tQ8C7E9 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.75■■□□□ 1.23
Cstf2tQ8C7E9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.74■■□□□ 1.23
Cstf2tQ8C7E9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Cstf2tQ8C7E9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cstf2tQ8C7E9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cstf2tQ8C7E9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cstf2tQ8C7E9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Gm21956-201ENSMUST00000179946 522 ntBASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cstf2tQ8C7E9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cstf2tQ8C7E9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cstf2tQ8C7E9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cstf2tQ8C7E9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Gm44428-201ENSMUST00000204474 874 ntBASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cstf2tQ8C7E9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cstf2tQ8C7E9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.7■■□□□ 1.22
Cstf2tQ8C7E9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC22.7■■□□□ 1.22
Cstf2tQ8C7E9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.7■■□□□ 1.22
Cstf2tQ8C7E9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.69■■□□□ 1.22
Cstf2tQ8C7E9 Gm13241-201ENSMUST00000094493 780 ntBASIC22.69■■□□□ 1.22
Cstf2tQ8C7E9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cstf2tQ8C7E9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Cstf2tQ8C7E9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Cstf2tQ8C7E9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cstf2tQ8C7E9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cstf2tQ8C7E9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.67■■□□□ 1.22
Cstf2tQ8C7E9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.67■■□□□ 1.22
Cstf2tQ8C7E9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Cstf2tQ8C7E9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms