Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cdk5rap1Q8BTW8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cdk5rap1Q8BTW8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Cdk5rap1Q8BTW8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap1Q8BTW8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap1Q8BTW8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cdk5rap1Q8BTW8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap1Q8BTW8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cdk5rap1Q8BTW8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm5921-201ENSMUST00000075898 882 ntBASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
Cdk5rap1Q8BTW8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cdk5rap1Q8BTW8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.17■□□□□ 0.98
Cdk5rap1Q8BTW8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap1Q8BTW8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cdk5rap1Q8BTW8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.15■□□□□ 0.98
Cdk5rap1Q8BTW8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Cdk5rap1Q8BTW8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Cdk5rap1Q8BTW8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.14■□□□□ 0.98
Cdk5rap1Q8BTW8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk5rap1Q8BTW8 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk5rap1Q8BTW8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cdk5rap1Q8BTW8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cdk5rap1Q8BTW8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Cdk5rap1Q8BTW8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cdk5rap1Q8BTW8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdk5rap1Q8BTW8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cdk5rap1Q8BTW8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Cdk5rap1Q8BTW8 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cdk5rap1Q8BTW8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdk5rap1Q8BTW8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdk5rap1Q8BTW8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 183.8 ms