Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc5a7Q8BGY9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc5a7Q8BGY9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Slc5a7Q8BGY9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc5a7Q8BGY9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Slc5a7Q8BGY9 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.58■□□□□ 0.72
Slc5a7Q8BGY9 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Slc5a7Q8BGY9 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc5a7Q8BGY9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
Slc5a7Q8BGY9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Slc5a7Q8BGY9 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc5a7Q8BGY9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Slc5a7Q8BGY9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc5a7Q8BGY9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Slc5a7Q8BGY9 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc5a7Q8BGY9 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Slc5a7Q8BGY9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc5a7Q8BGY9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Slc5a7Q8BGY9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Slc5a7Q8BGY9 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Slc5a7Q8BGY9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc5a7Q8BGY9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc5a7Q8BGY9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.54■□□□□ 0.72
Slc5a7Q8BGY9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc5a7Q8BGY9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc5a7Q8BGY9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc5a7Q8BGY9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Slc5a7Q8BGY9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc5a7Q8BGY9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc5a7Q8BGY9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc5a7Q8BGY9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc5a7Q8BGY9 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Slc5a7Q8BGY9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc5a7Q8BGY9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc5a7Q8BGY9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc5a7Q8BGY9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc5a7Q8BGY9 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.49■□□□□ 0.71
Slc5a7Q8BGY9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc5a7Q8BGY9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Slc5a7Q8BGY9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc5a7Q8BGY9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc5a7Q8BGY9 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Slc5a7Q8BGY9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.46■□□□□ 0.71
Slc5a7Q8BGY9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc5a7Q8BGY9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Slc5a7Q8BGY9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Slc5a7Q8BGY9 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.45■□□□□ 0.7
Slc5a7Q8BGY9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc5a7Q8BGY9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc5a7Q8BGY9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc5a7Q8BGY9 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Slc5a7Q8BGY9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc5a7Q8BGY9 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc5a7Q8BGY9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Slc5a7Q8BGY9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Slc5a7Q8BGY9 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Slc5a7Q8BGY9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Slc5a7Q8BGY9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms