Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VRK2Q86Y07 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
VRK2Q86Y07 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VRK2Q86Y07 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
VRK2Q86Y07 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
VRK2Q86Y07 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VRK2Q86Y07 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
VRK2Q86Y07 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.66■■□□□ 1.22
VRK2Q86Y07 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
VRK2Q86Y07 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
VRK2Q86Y07 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
VRK2Q86Y07 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
VRK2Q86Y07 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.66■■□□□ 1.22
VRK2Q86Y07 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.65■■□□□ 1.22
VRK2Q86Y07 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
VRK2Q86Y07 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VRK2Q86Y07 MIR3648-2-201ENST00000581792 180 ntBASIC22.65■■□□□ 1.22
VRK2Q86Y07 MIR3648-1-201ENST00000615959 180 ntBASIC22.65■■□□□ 1.22
VRK2Q86Y07 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
VRK2Q86Y07 DUSP8P4-201ENST00000399538 1761 ntBASIC22.65■■□□□ 1.22
VRK2Q86Y07 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
VRK2Q86Y07 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
VRK2Q86Y07 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
VRK2Q86Y07 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.64■■□□□ 1.21
VRK2Q86Y07 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VRK2Q86Y07 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
VRK2Q86Y07 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VRK2Q86Y07 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
VRK2Q86Y07 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
VRK2Q86Y07 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
VRK2Q86Y07 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.63■■□□□ 1.21
VRK2Q86Y07 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.63■■□□□ 1.21
VRK2Q86Y07 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.63■■□□□ 1.21
VRK2Q86Y07 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
VRK2Q86Y07 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VRK2Q86Y07 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
VRK2Q86Y07 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VRK2Q86Y07 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRK2Q86Y07 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
VRK2Q86Y07 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRK2Q86Y07 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRK2Q86Y07 AL359258.2-201ENST00000564063 1566 ntBASIC22.62■■□□□ 1.21
VRK2Q86Y07 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
VRK2Q86Y07 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.61■■□□□ 1.21
VRK2Q86Y07 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRK2Q86Y07 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC22.61■■□□□ 1.21
VRK2Q86Y07 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRK2Q86Y07 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
VRK2Q86Y07 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
VRK2Q86Y07 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRK2Q86Y07 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.61■■□□□ 1.21
VRK2Q86Y07 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
VRK2Q86Y07 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
VRK2Q86Y07 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VRK2Q86Y07 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.6■■□□□ 1.21
VRK2Q86Y07 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.6■■□□□ 1.21
VRK2Q86Y07 AC016575.1-201ENST00000607026 382 ntBASIC22.6■■□□□ 1.21
VRK2Q86Y07 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.6■■□□□ 1.21
VRK2Q86Y07 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
VRK2Q86Y07 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
VRK2Q86Y07 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
VRK2Q86Y07 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRK2Q86Y07 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRK2Q86Y07 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRK2Q86Y07 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRK2Q86Y07 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
VRK2Q86Y07 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
VRK2Q86Y07 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRK2Q86Y07 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VRK2Q86Y07 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.58■■□□□ 1.21
VRK2Q86Y07 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.21
VRK2Q86Y07 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.58■■□□□ 1.21
VRK2Q86Y07 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
VRK2Q86Y07 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.58■■□□□ 1.21
VRK2Q86Y07 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRK2Q86Y07 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
VRK2Q86Y07 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
VRK2Q86Y07 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.57■■□□□ 1.2
VRK2Q86Y07 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VRK2Q86Y07 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
VRK2Q86Y07 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
VRK2Q86Y07 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRK2Q86Y07 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
VRK2Q86Y07 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.57■■□□□ 1.2
VRK2Q86Y07 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.56■■□□□ 1.2
VRK2Q86Y07 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VRK2Q86Y07 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
VRK2Q86Y07 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VRK2Q86Y07 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
VRK2Q86Y07 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.55■■□□□ 1.2
VRK2Q86Y07 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VRK2Q86Y07 ERN1-208ENST00000606895 2068 ntBASIC22.55■■□□□ 1.2
VRK2Q86Y07 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VRK2Q86Y07 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
VRK2Q86Y07 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
VRK2Q86Y07 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.54■■□□□ 1.2
VRK2Q86Y07 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
VRK2Q86Y07 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
VRK2Q86Y07 AL359504.2-201ENST00000605506 1601 ntBASIC22.53■■□□□ 1.2
VRK2Q86Y07 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms