Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atpaf1Q811I0 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.26■□□□□ 0.51
Atpaf1Q811I0 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atpaf1Q811I0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atpaf1Q811I0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atpaf1Q811I0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atpaf1Q811I0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atpaf1Q811I0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atpaf1Q811I0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atpaf1Q811I0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atpaf1Q811I0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Atpaf1Q811I0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Atpaf1Q811I0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atpaf1Q811I0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.22■□□□□ 0.51
Atpaf1Q811I0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atpaf1Q811I0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atpaf1Q811I0 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Atpaf1Q811I0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Atpaf1Q811I0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Atpaf1Q811I0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atpaf1Q811I0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atpaf1Q811I0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Atpaf1Q811I0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Atpaf1Q811I0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atpaf1Q811I0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Atpaf1Q811I0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atpaf1Q811I0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atpaf1Q811I0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Atpaf1Q811I0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.18■□□□□ 0.5
Atpaf1Q811I0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Atpaf1Q811I0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Atpaf1Q811I0 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Atpaf1Q811I0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Atpaf1Q811I0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Atpaf1Q811I0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atpaf1Q811I0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atpaf1Q811I0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atpaf1Q811I0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Atpaf1Q811I0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Atpaf1Q811I0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Atpaf1Q811I0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atpaf1Q811I0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Atpaf1Q811I0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.49
Atpaf1Q811I0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Atpaf1Q811I0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Atpaf1Q811I0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atpaf1Q811I0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Atpaf1Q811I0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Atpaf1Q811I0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atpaf1Q811I0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Atpaf1Q811I0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.11■□□□□ 0.49
Atpaf1Q811I0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
Atpaf1Q811I0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.11■□□□□ 0.49
Atpaf1Q811I0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Atpaf1Q811I0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Gm16148-201ENSMUST00000119653 893 ntBASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Gm24804-201ENSMUST00000174982 85 ntBASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Atpaf1Q811I0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Atpaf1Q811I0 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms