Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf168Q80XJ2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Rnf168Q80XJ2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Rnf168Q80XJ2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.74■■□□□ 1.39
Rnf168Q80XJ2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf168Q80XJ2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf168Q80XJ2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Rnf168Q80XJ2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.72■■□□□ 1.39
Rnf168Q80XJ2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf168Q80XJ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf168Q80XJ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Rnf168Q80XJ2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
Rnf168Q80XJ2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf168Q80XJ2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf168Q80XJ2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Rnf168Q80XJ2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.71■■□□□ 1.39
Rnf168Q80XJ2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Rnf168Q80XJ2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf168Q80XJ2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Rnf168Q80XJ2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf168Q80XJ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Rnf168Q80XJ2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf168Q80XJ2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Rnf168Q80XJ2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Rnf168Q80XJ2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf168Q80XJ2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf168Q80XJ2 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf168Q80XJ2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Rnf168Q80XJ2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf168Q80XJ2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf168Q80XJ2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Rnf168Q80XJ2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf168Q80XJ2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Rnf168Q80XJ2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Rnf168Q80XJ2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Rnf168Q80XJ2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Rnf168Q80XJ2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rnf168Q80XJ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Rnf168Q80XJ2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Rnf168Q80XJ2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.65■■□□□ 1.38
Rnf168Q80XJ2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf168Q80XJ2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Rnf168Q80XJ2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf168Q80XJ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Rnf168Q80XJ2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.63■■□□□ 1.37
Rnf168Q80XJ2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.63■■□□□ 1.37
Rnf168Q80XJ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf168Q80XJ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf168Q80XJ2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Rnf168Q80XJ2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Rnf168Q80XJ2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf168Q80XJ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.61■■□□□ 1.37
Rnf168Q80XJ2 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.61■■□□□ 1.37
Rnf168Q80XJ2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Gm15546-201ENSMUST00000122095 826 ntBASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rnf168Q80XJ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Rnf168Q80XJ2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf168Q80XJ2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf168Q80XJ2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf168Q80XJ2 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rnf168Q80XJ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Rnf168Q80XJ2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.58■■□□□ 1.37
Rnf168Q80XJ2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Rnf168Q80XJ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rnf168Q80XJ2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Rnf168Q80XJ2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Rnf168Q80XJ2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf168Q80XJ2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.56■■□□□ 1.36
Rnf168Q80XJ2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Rnf168Q80XJ2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rnf168Q80XJ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Rnf168Q80XJ2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Rnf168Q80XJ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf168Q80XJ2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf168Q80XJ2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rnf168Q80XJ2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf168Q80XJ2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf168Q80XJ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.54■■□□□ 1.36
Rnf168Q80XJ2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf168Q80XJ2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Rnf168Q80XJ2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf168Q80XJ2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf168Q80XJ2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf168Q80XJ2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rnf168Q80XJ2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf168Q80XJ2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rnf168Q80XJ2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.52■■□□□ 1.36
Rnf168Q80XJ2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.51■■□□□ 1.35
Rnf168Q80XJ2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.51■■□□□ 1.35
Rnf168Q80XJ2 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.51■■□□□ 1.35
Rnf168Q80XJ2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf168Q80XJ2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rnf168Q80XJ2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf168Q80XJ2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rnf168Q80XJ2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms