Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.77■□□□□ 0.11
Csmd3Q80T79 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Csmd3Q80T79 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
Csmd3Q80T79 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Csmd3Q80T79 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Csmd3Q80T79 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Csmd3Q80T79 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.75■□□□□ 0.11
Csmd3Q80T79 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.75■□□□□ 0.11
Csmd3Q80T79 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Csmd3Q80T79 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.75■□□□□ 0.11
Csmd3Q80T79 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Csmd3Q80T79 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Csmd3Q80T79 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Csmd3Q80T79 Gm18755-201ENSMUST00000218030 1099 ntBASIC15.73■□□□□ 0.11
Csmd3Q80T79 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Csmd3Q80T79 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Csmd3Q80T79 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Csmd3Q80T79 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Csmd3Q80T79 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Csmd3Q80T79 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.72■□□□□ 0.11
Csmd3Q80T79 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.72■□□□□ 0.11
Csmd3Q80T79 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.71■□□□□ 0.11
Csmd3Q80T79 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Csmd3Q80T79 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC15.71■□□□□ 0.11
Csmd3Q80T79 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Csmd3Q80T79 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Csmd3Q80T79 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Csmd3Q80T79 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Gm6206-201ENSMUST00000133472 2199 ntBASIC15.7■□□□□ 0.1
Csmd3Q80T79 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Csmd3Q80T79 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Csmd3Q80T79 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.7■□□□□ 0.1
Csmd3Q80T79 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.69■□□□□ 0.1
Csmd3Q80T79 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Csmd3Q80T79 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Csmd3Q80T79 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.69■□□□□ 0.1
Csmd3Q80T79 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC15.69■□□□□ 0.1
Csmd3Q80T79 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.68■□□□□ 0.1
Csmd3Q80T79 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Csmd3Q80T79 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Csmd3Q80T79 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Csmd3Q80T79 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Csmd3Q80T79 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csmd3Q80T79 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csmd3Q80T79 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csmd3Q80T79 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Csmd3Q80T79 Gm43034-201ENSMUST00000198678 1364 ntBASIC15.66■□□□□ 0.1
Csmd3Q80T79 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Csmd3Q80T79 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csmd3Q80T79 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Csmd3Q80T79 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csmd3Q80T79 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csmd3Q80T79 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.65■□□□□ 0.1
Csmd3Q80T79 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.65■□□□□ 0.1
Csmd3Q80T79 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.65■□□□□ 0.1
Csmd3Q80T79 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csmd3Q80T79 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Csmd3Q80T79 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csmd3Q80T79 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csmd3Q80T79 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Csmd3Q80T79 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Csmd3Q80T79 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Csmd3Q80T79 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Csmd3Q80T79 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csmd3Q80T79 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csmd3Q80T79 Gm13241-201ENSMUST00000094493 780 ntBASIC15.63■□□□□ 0.09
Csmd3Q80T79 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC15.63■□□□□ 0.09
Csmd3Q80T79 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.63■□□□□ 0.09
Csmd3Q80T79 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Csmd3Q80T79 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Csmd3Q80T79 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Csmd3Q80T79 Gm5131-201ENSMUST00000212776 1238 ntBASIC15.62■□□□□ 0.09
Csmd3Q80T79 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Csmd3Q80T79 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms