Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC23.22■■□□□ 1.31
Prpf38bQ80SY5 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Prpf38bQ80SY5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.21■■□□□ 1.31
Prpf38bQ80SY5 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prpf38bQ80SY5 Gm13238-201ENSMUST00000117655 780 ntBASIC23.21■■□□□ 1.31
Prpf38bQ80SY5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Prpf38bQ80SY5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf38bQ80SY5 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf38bQ80SY5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf38bQ80SY5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf38bQ80SY5 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prpf38bQ80SY5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf38bQ80SY5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.18■■□□□ 1.3
Prpf38bQ80SY5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf38bQ80SY5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prpf38bQ80SY5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf38bQ80SY5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf38bQ80SY5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf38bQ80SY5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Prpf38bQ80SY5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.17■■□□□ 1.3
Prpf38bQ80SY5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.17■■□□□ 1.3
Prpf38bQ80SY5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.16■■□□□ 1.3
Prpf38bQ80SY5 Gm45444-201ENSMUST00000211394 898 ntBASIC23.16■■□□□ 1.3
Prpf38bQ80SY5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Prpf38bQ80SY5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.16■■□□□ 1.3
Prpf38bQ80SY5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf38bQ80SY5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.15■■□□□ 1.3
Prpf38bQ80SY5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf38bQ80SY5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Prpf38bQ80SY5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Prpf38bQ80SY5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Prpf38bQ80SY5 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prpf38bQ80SY5 Gm9959-201ENSMUST00000068277 390 ntBASIC23.14■■□□□ 1.29
Prpf38bQ80SY5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prpf38bQ80SY5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prpf38bQ80SY5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf38bQ80SY5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf38bQ80SY5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf38bQ80SY5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Prpf38bQ80SY5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Prpf38bQ80SY5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf38bQ80SY5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.11■■□□□ 1.29
Prpf38bQ80SY5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.11■■□□□ 1.29
Prpf38bQ80SY5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.11■■□□□ 1.29
Prpf38bQ80SY5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.11■■□□□ 1.29
Prpf38bQ80SY5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.11■■□□□ 1.29
Prpf38bQ80SY5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf38bQ80SY5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf38bQ80SY5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.1■■□□□ 1.29
Prpf38bQ80SY5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.1■■□□□ 1.29
Prpf38bQ80SY5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf38bQ80SY5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38bQ80SY5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38bQ80SY5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38bQ80SY5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.09■■□□□ 1.29
Prpf38bQ80SY5 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.09■■□□□ 1.29
Prpf38bQ80SY5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.09■■□□□ 1.29
Prpf38bQ80SY5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Prpf38bQ80SY5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Prpf38bQ80SY5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Prpf38bQ80SY5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Prpf38bQ80SY5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38bQ80SY5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Prpf38bQ80SY5 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.07■■□□□ 1.28
Prpf38bQ80SY5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38bQ80SY5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38bQ80SY5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38bQ80SY5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38bQ80SY5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Prpf38bQ80SY5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.04■■□□□ 1.28
Prpf38bQ80SY5 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38bQ80SY5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38bQ80SY5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Prpf38bQ80SY5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
Prpf38bQ80SY5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38bQ80SY5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38bQ80SY5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.02■■□□□ 1.28
Prpf38bQ80SY5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.02■■□□□ 1.28
Prpf38bQ80SY5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms