Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAI1Q7Z5J4 DUX4L18-201ENST00000553347 1267 ntBASIC21.21■□□□□ 0.99
RAI1Q7Z5J4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAI1Q7Z5J4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAI1Q7Z5J4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RAI1Q7Z5J4 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAI1Q7Z5J4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAI1Q7Z5J4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RAI1Q7Z5J4 MIR3960-201ENST00000583311 91 ntBASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 AL035685.1-201ENST00000636663 812 ntBASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAI1Q7Z5J4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAI1Q7Z5J4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RAI1Q7Z5J4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.15■□□□□ 0.98
RAI1Q7Z5J4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAI1Q7Z5J4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.14■□□□□ 0.98
RAI1Q7Z5J4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAI1Q7Z5J4 PVT1_1.1-201ENST00000615125 194 ntBASIC21.14■□□□□ 0.98
RAI1Q7Z5J4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 AC009299.2-201ENST00000482477 511 ntBASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 MIR6765-201ENST00000614092 87 ntBASIC21.14■□□□□ 0.97
RAI1Q7Z5J4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 MIR4508-201ENST00000584178 70 ntBASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RAI1Q7Z5J4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RAI1Q7Z5J4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.11■□□□□ 0.97
RAI1Q7Z5J4 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
RAI1Q7Z5J4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RAI1Q7Z5J4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 AL359504.2-201ENST00000605506 1601 ntBASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RAI1Q7Z5J4 WHAMMP3-201ENST00000611636 1609 ntBASIC21.08■□□□□ 0.97
RAI1Q7Z5J4 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
RAI1Q7Z5J4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.08■□□□□ 0.96
RAI1Q7Z5J4 LINC01003-201ENST00000564834 1764 ntBASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 AC139795.1-202ENST00000500444 432 ntBASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 AC010980.1-201ENST00000587192 1142 ntBASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
RAI1Q7Z5J4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 AC142086.6-201ENST00000621154 1765 ntBASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 AC103724.3-201ENST00000564481 992 ntBASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 AC074183.2-201ENST00000623112 922 ntBASIC21.06■□□□□ 0.96
RAI1Q7Z5J4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
RAI1Q7Z5J4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms