Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc36Q6PDM4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc36Q6PDM4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc36Q6PDM4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc36Q6PDM4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc36Q6PDM4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc36Q6PDM4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc36Q6PDM4 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc36Q6PDM4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc36Q6PDM4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ccdc36Q6PDM4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc36Q6PDM4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc36Q6PDM4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc36Q6PDM4 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ccdc36Q6PDM4 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc36Q6PDM4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc36Q6PDM4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc36Q6PDM4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc36Q6PDM4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc36Q6PDM4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc36Q6PDM4 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ccdc36Q6PDM4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccdc36Q6PDM4 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc36Q6PDM4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc36Q6PDM4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccdc36Q6PDM4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccdc36Q6PDM4 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Ccdc36Q6PDM4 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc36Q6PDM4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc36Q6PDM4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc36Q6PDM4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Ccdc36Q6PDM4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc36Q6PDM4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.79■□□□□ 0.6
Ccdc36Q6PDM4 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc36Q6PDM4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc36Q6PDM4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc36Q6PDM4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc36Q6PDM4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc36Q6PDM4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.77■□□□□ 0.6
Ccdc36Q6PDM4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Ccdc36Q6PDM4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc36Q6PDM4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc36Q6PDM4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc36Q6PDM4 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc36Q6PDM4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc36Q6PDM4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Nkain2-201ENSMUST00000092602 558 ntBASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc36Q6PDM4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc36Q6PDM4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc36Q6PDM4 Particl-201ENSMUST00000205370 1560 ntBASIC18.74■□□□□ 0.59
Ccdc36Q6PDM4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc36Q6PDM4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc36Q6PDM4 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms