Protein–RNA interactions for Protein: Q6PDJ1

Cachd1, VWFA and cache domain-containing protein 1, mousemouse

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cachd1Q6PDJ1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cachd1Q6PDJ1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cachd1Q6PDJ1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.76■■□□□ 1.23
Cachd1Q6PDJ1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.76■■□□□ 1.23
Cachd1Q6PDJ1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cachd1Q6PDJ1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.76■■□□□ 1.23
Cachd1Q6PDJ1 Gm28731-201ENSMUST00000185564 1569 ntBASIC22.76■■□□□ 1.23
Cachd1Q6PDJ1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cachd1Q6PDJ1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cachd1Q6PDJ1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cachd1Q6PDJ1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Cachd1Q6PDJ1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
Cachd1Q6PDJ1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cachd1Q6PDJ1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Cachd1Q6PDJ1 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cachd1Q6PDJ1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cachd1Q6PDJ1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.71■■□□□ 1.23
Cachd1Q6PDJ1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
Cachd1Q6PDJ1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
Cachd1Q6PDJ1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cachd1Q6PDJ1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
Cachd1Q6PDJ1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cachd1Q6PDJ1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Cachd1Q6PDJ1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cachd1Q6PDJ1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Gm12922-201ENSMUST00000120626 809 ntBASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cachd1Q6PDJ1 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.68■■□□□ 1.22
Cachd1Q6PDJ1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cachd1Q6PDJ1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.68■■□□□ 1.22
Cachd1Q6PDJ1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cachd1Q6PDJ1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Cachd1Q6PDJ1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.68■■□□□ 1.22
Cachd1Q6PDJ1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cachd1Q6PDJ1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cachd1Q6PDJ1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cachd1Q6PDJ1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cachd1Q6PDJ1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cachd1Q6PDJ1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.66■■□□□ 1.22
Cachd1Q6PDJ1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.66■■□□□ 1.22
Cachd1Q6PDJ1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cachd1Q6PDJ1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cachd1Q6PDJ1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Cachd1Q6PDJ1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cachd1Q6PDJ1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cachd1Q6PDJ1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cachd1Q6PDJ1 Gm22238-201ENSMUST00000175222 88 ntBASIC22.63■■□□□ 1.21
Cachd1Q6PDJ1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cachd1Q6PDJ1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cachd1Q6PDJ1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Cachd1Q6PDJ1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cachd1Q6PDJ1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.61■■□□□ 1.21
Cachd1Q6PDJ1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.61■■□□□ 1.21
Cachd1Q6PDJ1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cachd1Q6PDJ1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms