Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm10232-201ENSMUST00000089221 720 ntBASIC28.15■■■□□ 2.1
Col11a2Q64739 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Col11a2Q64739 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.14■■■□□ 2.1
Col11a2Q64739 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col11a2Q64739 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC28.13■■■□□ 2.09
Col11a2Q64739 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col11a2Q64739 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col11a2Q64739 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col11a2Q64739 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col11a2Q64739 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col11a2Q64739 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col11a2Q64739 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col11a2Q64739 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC28.12■■■□□ 2.09
Col11a2Q64739 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col11a2Q64739 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col11a2Q64739 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Col11a2Q64739 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col11a2Q64739 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col11a2Q64739 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Col11a2Q64739 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col11a2Q64739 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col11a2Q64739 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC28.09■■■□□ 2.09
Col11a2Q64739 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC28.09■■■□□ 2.09
Col11a2Q64739 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC28.09■■■□□ 2.09
Col11a2Q64739 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col11a2Q64739 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC28.08■■■□□ 2.09
Col11a2Q64739 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Col11a2Q64739 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC28.08■■■□□ 2.09
Col11a2Q64739 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.08
Col11a2Q64739 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col11a2Q64739 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Col11a2Q64739 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
Col11a2Q64739 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col11a2Q64739 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC28.06■■■□□ 2.08
Col11a2Q64739 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC28.06■■■□□ 2.08
Col11a2Q64739 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC28.06■■■□□ 2.08
Col11a2Q64739 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Col11a2Q64739 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col11a2Q64739 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col11a2Q64739 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC28.05■■■□□ 2.08
Col11a2Q64739 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col11a2Q64739 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Col11a2Q64739 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Col11a2Q64739 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Col11a2Q64739 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Col11a2Q64739 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC28.04■■■□□ 2.08
Col11a2Q64739 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col11a2Q64739 Gm5131-201ENSMUST00000212776 1238 ntBASIC28.03■■■□□ 2.08
Col11a2Q64739 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Col11a2Q64739 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col11a2Q64739 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col11a2Q64739 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Col11a2Q64739 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC28.02■■■□□ 2.08
Col11a2Q64739 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col11a2Q64739 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Col11a2Q64739 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col11a2Q64739 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col11a2Q64739 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col11a2Q64739 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Col11a2Q64739 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Col11a2Q64739 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28■■■□□ 2.07
Col11a2Q64739 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC28■■■□□ 2.07
Col11a2Q64739 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Col11a2Q64739 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Col11a2Q64739 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC27.99■■■□□ 2.07
Col11a2Q64739 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Col11a2Q64739 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Col11a2Q64739 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Col11a2Q64739 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.99■■■□□ 2.07
Col11a2Q64739 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC27.98■■■□□ 2.07
Col11a2Q64739 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Col11a2Q64739 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Col11a2Q64739 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
Col11a2Q64739 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col11a2Q64739 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col11a2Q64739 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Col11a2Q64739 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC27.97■■■□□ 2.07
Col11a2Q64739 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Col11a2Q64739 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
Col11a2Q64739 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Col11a2Q64739 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col11a2Q64739 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col11a2Q64739 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Col11a2Q64739 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Col11a2Q64739 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Col11a2Q64739 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC27.94■■■□□ 2.06
Col11a2Q64739 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Col11a2Q64739 Etf1-202ENSMUST00000180351 108 ntBASIC27.93■■■□□ 2.06
Col11a2Q64739 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Col11a2Q64739 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC27.92■■■□□ 2.06
Col11a2Q64739 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Col11a2Q64739 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col11a2Q64739 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC27.92■■■□□ 2.06
Col11a2Q64739 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Col11a2Q64739 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
Col11a2Q64739 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Col11a2Q64739 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Col11a2Q64739 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC27.9■■■□□ 2.06
Col11a2Q64739 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Col11a2Q64739 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms