Protein–RNA interactions for Protein: Q61908

Cmc4, Cx9C motif-containing protein 4, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmc4Q61908 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cmc4Q61908 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cmc4Q61908 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cmc4Q61908 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cmc4Q61908 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cmc4Q61908 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cmc4Q61908 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cmc4Q61908 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cmc4Q61908 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Cmc4Q61908 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cmc4Q61908 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cmc4Q61908 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cmc4Q61908 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cmc4Q61908 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cmc4Q61908 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cmc4Q61908 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cmc4Q61908 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cmc4Q61908 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cmc4Q61908 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC16.26■□□□□ 0.19
Cmc4Q61908 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cmc4Q61908 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cmc4Q61908 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC16.25■□□□□ 0.19
Cmc4Q61908 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.25■□□□□ 0.19
Cmc4Q61908 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.25■□□□□ 0.19
Cmc4Q61908 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cmc4Q61908 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.24■□□□□ 0.19
Cmc4Q61908 Gm7332-201ENSMUST00000118351 454 ntBASIC16.24■□□□□ 0.19
Cmc4Q61908 Gm12366-201ENSMUST00000121722 873 ntBASIC16.24■□□□□ 0.19
Cmc4Q61908 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.24■□□□□ 0.19
Cmc4Q61908 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cmc4Q61908 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.24■□□□□ 0.19
Cmc4Q61908 Gm5786-201ENSMUST00000085368 882 ntBASIC16.24■□□□□ 0.19
Cmc4Q61908 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cmc4Q61908 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cmc4Q61908 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cmc4Q61908 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC16.23■□□□□ 0.19
Cmc4Q61908 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cmc4Q61908 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cmc4Q61908 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cmc4Q61908 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cmc4Q61908 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cmc4Q61908 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cmc4Q61908 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Cmc4Q61908 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.22■□□□□ 0.19
Cmc4Q61908 Gm14523-201ENSMUST00000117260 558 ntBASIC16.22■□□□□ 0.19
Cmc4Q61908 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cmc4Q61908 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.22■□□□□ 0.19
Cmc4Q61908 Cap2-205ENSMUST00000225824 1634 ntBASIC16.22■□□□□ 0.19
Cmc4Q61908 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cmc4Q61908 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cmc4Q61908 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cmc4Q61908 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cmc4Q61908 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Cmc4Q61908 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cmc4Q61908 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cmc4Q61908 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Cmc4Q61908 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cmc4Q61908 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cmc4Q61908 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cmc4Q61908 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cmc4Q61908 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cmc4Q61908 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cmc4Q61908 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cmc4Q61908 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cmc4Q61908 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cmc4Q61908 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cmc4Q61908 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC16.19■□□□□ 0.18
Cmc4Q61908 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.19■□□□□ 0.18
Cmc4Q61908 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC16.19■□□□□ 0.18
Cmc4Q61908 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.19■□□□□ 0.18
Cmc4Q61908 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Cmc4Q61908 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cmc4Q61908 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cmc4Q61908 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Cmc4Q61908 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cmc4Q61908 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cmc4Q61908 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cmc4Q61908 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cmc4Q61908 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Cmc4Q61908 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cmc4Q61908 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.17■□□□□ 0.18
Cmc4Q61908 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cmc4Q61908 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.16■□□□□ 0.18
Cmc4Q61908 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.16■□□□□ 0.18
Cmc4Q61908 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cmc4Q61908 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Cmc4Q61908 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cmc4Q61908 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Cmc4Q61908 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Cmc4Q61908 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Cmc4Q61908 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Cmc4Q61908 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.15■□□□□ 0.18
Cmc4Q61908 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.15■□□□□ 0.18
Cmc4Q61908 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms