Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Scarb1Q61009 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarb1Q61009 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarb1Q61009 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scarb1Q61009 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.72■□□□□ 0.59
Scarb1Q61009 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarb1Q61009 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarb1Q61009 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarb1Q61009 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarb1Q61009 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarb1Q61009 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scarb1Q61009 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarb1Q61009 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarb1Q61009 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarb1Q61009 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarb1Q61009 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scarb1Q61009 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.7■□□□□ 0.58
Scarb1Q61009 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Scarb1Q61009 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scarb1Q61009 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scarb1Q61009 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Scarb1Q61009 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Scarb1Q61009 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarb1Q61009 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarb1Q61009 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Scarb1Q61009 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Scarb1Q61009 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Scarb1Q61009 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Scarb1Q61009 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Scarb1Q61009 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Scarb1Q61009 Notumos-201ENSMUST00000151998 2659 ntBASIC18.67■□□□□ 0.58
Scarb1Q61009 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Scarb1Q61009 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Scarb1Q61009 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.66■□□□□ 0.58
Scarb1Q61009 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Scarb1Q61009 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.65■□□□□ 0.58
Scarb1Q61009 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Scarb1Q61009 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scarb1Q61009 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Scarb1Q61009 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.64■□□□□ 0.57
Scarb1Q61009 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scarb1Q61009 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scarb1Q61009 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.63■□□□□ 0.57
Scarb1Q61009 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scarb1Q61009 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scarb1Q61009 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scarb1Q61009 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scarb1Q61009 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.63■□□□□ 0.57
Scarb1Q61009 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scarb1Q61009 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scarb1Q61009 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
Scarb1Q61009 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.62■□□□□ 0.57
Scarb1Q61009 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Scarb1Q61009 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scarb1Q61009 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.62■□□□□ 0.57
Scarb1Q61009 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Scarb1Q61009 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
Scarb1Q61009 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scarb1Q61009 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Scarb1Q61009 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scarb1Q61009 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Scarb1Q61009 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scarb1Q61009 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
Scarb1Q61009 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Scarb1Q61009 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scarb1Q61009 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scarb1Q61009 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scarb1Q61009 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms