Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK2Q5S007 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
LRRK2Q5S007 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.93■■□□□ 1.1
LRRK2Q5S007 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRK2Q5S007 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRK2Q5S007 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.91■■□□□ 1.1
LRRK2Q5S007 RARRES2P6-201ENST00000567333 442 ntBASIC21.91■■□□□ 1.1
LRRK2Q5S007 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LRRK2Q5S007 AC104564.3-201ENST00000582367 638 ntBASIC21.91■■□□□ 1.1
LRRK2Q5S007 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK2Q5S007 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK2Q5S007 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRK2Q5S007 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK2Q5S007 KRT16P3-201ENST00000439127 1283 ntBASIC21.9■■□□□ 1.1
LRRK2Q5S007 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.9■■□□□ 1.1
LRRK2Q5S007 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.9■■□□□ 1.1
LRRK2Q5S007 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK2Q5S007 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRK2Q5S007 BX664725.1-201ENST00000438252 379 ntBASIC21.9■■□□□ 1.1
LRRK2Q5S007 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRK2Q5S007 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK2Q5S007 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.89■■□□□ 1.1
LRRK2Q5S007 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRK2Q5S007 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LRRK2Q5S007 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
LRRK2Q5S007 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.89■■□□□ 1.09
LRRK2Q5S007 MIR3960-201ENST00000583311 91 ntBASIC21.89■■□□□ 1.09
LRRK2Q5S007 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
LRRK2Q5S007 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LRRK2Q5S007 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
LRRK2Q5S007 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRK2Q5S007 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.87■■□□□ 1.09
LRRK2Q5S007 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LRRK2Q5S007 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.87■■□□□ 1.09
LRRK2Q5S007 ZNRF2P3-201ENST00000424200 374 ntBASIC21.86■■□□□ 1.09
LRRK2Q5S007 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRK2Q5S007 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LRRK2Q5S007 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LRRK2Q5S007 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.86■■□□□ 1.09
LRRK2Q5S007 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LRRK2Q5S007 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
LRRK2Q5S007 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.85■■□□□ 1.09
LRRK2Q5S007 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LRRK2Q5S007 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRK2Q5S007 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LRRK2Q5S007 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRK2Q5S007 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
LRRK2Q5S007 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LRRK2Q5S007 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.83■■□□□ 1.09
LRRK2Q5S007 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRK2Q5S007 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LRRK2Q5S007 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.82■■□□□ 1.08
LRRK2Q5S007 AC133561.4-201ENST00000566112 224 ntBASIC21.82■■□□□ 1.08
LRRK2Q5S007 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LRRK2Q5S007 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC21.82■■□□□ 1.08
LRRK2Q5S007 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 AC022616.5-201ENST00000518796 181 ntBASIC21.81■■□□□ 1.08
LRRK2Q5S007 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.81■■□□□ 1.08
LRRK2Q5S007 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LRRK2Q5S007 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.8■■□□□ 1.08
LRRK2Q5S007 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.8■■□□□ 1.08
LRRK2Q5S007 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LRRK2Q5S007 MIR5787-201ENST00000611784 55 ntBASIC21.8■■□□□ 1.08
LRRK2Q5S007 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LRRK2Q5S007 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 AC087393.1-201ENST00000582896 145 ntBASIC21.79■■□□□ 1.08
LRRK2Q5S007 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LRRK2Q5S007 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LRRK2Q5S007 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRK2Q5S007 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
LRRK2Q5S007 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LRRK2Q5S007 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
LRRK2Q5S007 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LRRK2Q5S007 AC096631.2-201ENST00000436136 790 ntBASIC21.76■■□□□ 1.07
LRRK2Q5S007 MIR4466-201ENST00000606121 54 ntBASIC21.76■■□□□ 1.07
LRRK2Q5S007 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms