Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-3Q5R1I1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav7d-3Q5R1I1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav7d-3Q5R1I1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-3Q5R1I1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav7d-3Q5R1I1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav7d-3Q5R1I1 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-3Q5R1I1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav7d-3Q5R1I1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav7d-3Q5R1I1 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav7d-3Q5R1I1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trav7d-3Q5R1I1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-3Q5R1I1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-3Q5R1I1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.23■□□□□ 0.19
Trav7d-3Q5R1I1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-3Q5R1I1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav7d-3Q5R1I1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Gm4799-201ENSMUST00000095396 657 ntBASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav7d-3Q5R1I1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav7d-3Q5R1I1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav7d-3Q5R1I1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Trav7d-3Q5R1I1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav7d-3Q5R1I1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav7d-3Q5R1I1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7d-3Q5R1I1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trav7d-3Q5R1I1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav7d-3Q5R1I1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav7d-3Q5R1I1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav7d-3Q5R1I1 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-3Q5R1I1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav7d-3Q5R1I1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC16.18■□□□□ 0.18
Trav7d-3Q5R1I1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-3Q5R1I1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-3Q5R1I1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav7d-3Q5R1I1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Gm7432-201ENSMUST00000210343 879 ntBASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav7d-3Q5R1I1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-3Q5R1I1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav7d-3Q5R1I1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav7d-3Q5R1I1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav7d-3Q5R1I1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Trav7d-3Q5R1I1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav7d-3Q5R1I1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.13■□□□□ 0.17
Trav7d-3Q5R1I1 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.13■□□□□ 0.17
Trav7d-3Q5R1I1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-3Q5R1I1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-3Q5R1I1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav7d-3Q5R1I1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms