Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.89■□□□□ 0.45
Trav6-3Q5R1E6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-3Q5R1E6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.89■□□□□ 0.45
Trav6-3Q5R1E6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav6-3Q5R1E6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Gm9812-201ENSMUST00000061934 968 ntBASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav6-3Q5R1E6 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-3Q5R1E6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-3Q5R1E6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.87■□□□□ 0.45
Trav6-3Q5R1E6 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.87■□□□□ 0.45
Trav6-3Q5R1E6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav6-3Q5R1E6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav6-3Q5R1E6 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.86■□□□□ 0.45
Trav6-3Q5R1E6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trav6-3Q5R1E6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-3Q5R1E6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav6-3Q5R1E6 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Trav6-3Q5R1E6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.85■□□□□ 0.45
Trav6-3Q5R1E6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-3Q5R1E6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-3Q5R1E6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-3Q5R1E6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-3Q5R1E6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.84■□□□□ 0.45
Trav6-3Q5R1E6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav6-3Q5R1E6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav6-3Q5R1E6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.83■□□□□ 0.45
Trav6-3Q5R1E6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trav6-3Q5R1E6 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trav6-3Q5R1E6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.82■□□□□ 0.44
Trav6-3Q5R1E6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Mir3960-201ENSMUST00000198213 73 ntBASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav6-3Q5R1E6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav6-3Q5R1E6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav6-3Q5R1E6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Gm7432-201ENSMUST00000210343 879 ntBASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav6-3Q5R1E6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav6-3Q5R1E6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.77■□□□□ 0.44
Trav6-3Q5R1E6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms