Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 SMPD5-203ENST00000639008 1464 ntBASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 RARRES2P2-201ENST00000394842 485 ntBASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01556Q5JQF7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01556Q5JQF7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 MIR3960-201ENST00000583311 91 ntBASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 AL121749.1-202ENST00000609313 2153 ntBASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01556Q5JQF7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01556Q5JQF7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01556Q5JQF7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01556Q5JQF7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01556Q5JQF7 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01556Q5JQF7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC01556Q5JQF7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
LINC01556Q5JQF7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LINC01556Q5JQF7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC01556Q5JQF7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.64■□□□□ 0.25
LINC01556Q5JQF7 AC007029.1-201ENST00000604183 313 ntBASIC16.64■□□□□ 0.25
LINC01556Q5JQF7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC16.64■□□□□ 0.25
LINC01556Q5JQF7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
LINC01556Q5JQF7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LINC01556Q5JQF7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 RP9P-202ENST00000450133 1212 ntBASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LINC01556Q5JQF7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LINC01556Q5JQF7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LINC01556Q5JQF7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LINC01556Q5JQF7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms