Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCSMST1Q4G0I0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.97■■□□□ 1.43
CCSMST1Q4G0I0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCSMST1Q4G0I0 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCSMST1Q4G0I0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.97■■□□□ 1.43
CCSMST1Q4G0I0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CCSMST1Q4G0I0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCSMST1Q4G0I0 AC092296.2-201ENST00000589470 999 ntBASIC23.95■■□□□ 1.42
CCSMST1Q4G0I0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCSMST1Q4G0I0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCSMST1Q4G0I0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.92■■□□□ 1.42
CCSMST1Q4G0I0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCSMST1Q4G0I0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCSMST1Q4G0I0 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCSMST1Q4G0I0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCSMST1Q4G0I0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCSMST1Q4G0I0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCSMST1Q4G0I0 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCSMST1Q4G0I0 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.91■■□□□ 1.42
CCSMST1Q4G0I0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCSMST1Q4G0I0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CCSMST1Q4G0I0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CCSMST1Q4G0I0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CCSMST1Q4G0I0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCSMST1Q4G0I0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.89■■□□□ 1.42
CCSMST1Q4G0I0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.89■■□□□ 1.41
CCSMST1Q4G0I0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.89■■□□□ 1.41
CCSMST1Q4G0I0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 HSD17B1P1-201ENST00000590052 955 ntBASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCSMST1Q4G0I0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCSMST1Q4G0I0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCSMST1Q4G0I0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCSMST1Q4G0I0 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
CCSMST1Q4G0I0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.85■■□□□ 1.41
CCSMST1Q4G0I0 ECEL1P2-201ENST00000461596 1295 ntBASIC23.84■■□□□ 1.41
CCSMST1Q4G0I0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC23.84■■□□□ 1.41
CCSMST1Q4G0I0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCSMST1Q4G0I0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.83■■□□□ 1.41
CCSMST1Q4G0I0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCSMST1Q4G0I0 AC025884.2-201ENST00000553429 711 ntBASIC23.83■■□□□ 1.41
CCSMST1Q4G0I0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.83■■□□□ 1.41
CCSMST1Q4G0I0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCSMST1Q4G0I0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CCSMST1Q4G0I0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.82■■□□□ 1.4
CCSMST1Q4G0I0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.82■■□□□ 1.4
CCSMST1Q4G0I0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.82■■□□□ 1.4
CCSMST1Q4G0I0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCSMST1Q4G0I0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCSMST1Q4G0I0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCSMST1Q4G0I0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.81■■□□□ 1.4
CCSMST1Q4G0I0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.81■■□□□ 1.4
CCSMST1Q4G0I0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.81■■□□□ 1.4
CCSMST1Q4G0I0 SMPD5-203ENST00000639008 1464 ntBASIC23.81■■□□□ 1.4
CCSMST1Q4G0I0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCSMST1Q4G0I0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.8■■□□□ 1.4
CCSMST1Q4G0I0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC23.8■■□□□ 1.4
CCSMST1Q4G0I0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.8■■□□□ 1.4
CCSMST1Q4G0I0 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CCSMST1Q4G0I0 RNF126P1-201ENST00000567452 1320 ntBASIC23.8■■□□□ 1.4
CCSMST1Q4G0I0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CCSMST1Q4G0I0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSMST1Q4G0I0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms