Protein–RNA interactions for Protein: Q3V0S8

1700012B07Rik, MCG19638, isoform CRA_b, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700012B07RikQ3V0S8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
1700012B07RikQ3V0S8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
1700012B07RikQ3V0S8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
1700012B07RikQ3V0S8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
1700012B07RikQ3V0S8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
1700012B07RikQ3V0S8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
1700012B07RikQ3V0S8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
1700012B07RikQ3V0S8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
1700012B07RikQ3V0S8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
1700012B07RikQ3V0S8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
1700012B07RikQ3V0S8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
1700012B07RikQ3V0S8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
1700012B07RikQ3V0S8 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
1700012B07RikQ3V0S8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.88■□□□□ 0.93
1700012B07RikQ3V0S8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
1700012B07RikQ3V0S8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
1700012B07RikQ3V0S8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
1700012B07RikQ3V0S8 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.88■□□□□ 0.93
1700012B07RikQ3V0S8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
1700012B07RikQ3V0S8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
1700012B07RikQ3V0S8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
1700012B07RikQ3V0S8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.87■□□□□ 0.93
1700012B07RikQ3V0S8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
1700012B07RikQ3V0S8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
1700012B07RikQ3V0S8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
1700012B07RikQ3V0S8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Gm12366-201ENSMUST00000121722 873 ntBASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Gm5786-201ENSMUST00000085368 882 ntBASIC20.85■□□□□ 0.93
1700012B07RikQ3V0S8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
1700012B07RikQ3V0S8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
1700012B07RikQ3V0S8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
1700012B07RikQ3V0S8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 Gm14523-201ENSMUST00000117260 558 ntBASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
1700012B07RikQ3V0S8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
1700012B07RikQ3V0S8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.82■□□□□ 0.92
1700012B07RikQ3V0S8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
1700012B07RikQ3V0S8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
1700012B07RikQ3V0S8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
1700012B07RikQ3V0S8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
1700012B07RikQ3V0S8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.81■□□□□ 0.92
1700012B07RikQ3V0S8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
1700012B07RikQ3V0S8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
1700012B07RikQ3V0S8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
1700012B07RikQ3V0S8 Cap2-205ENSMUST00000225824 1634 ntBASIC20.8■□□□□ 0.92
1700012B07RikQ3V0S8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.8■□□□□ 0.92
1700012B07RikQ3V0S8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.8■□□□□ 0.92
1700012B07RikQ3V0S8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
1700012B07RikQ3V0S8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
1700012B07RikQ3V0S8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
1700012B07RikQ3V0S8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
1700012B07RikQ3V0S8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
1700012B07RikQ3V0S8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.78■□□□□ 0.92
1700012B07RikQ3V0S8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
1700012B07RikQ3V0S8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
1700012B07RikQ3V0S8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
1700012B07RikQ3V0S8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
1700012B07RikQ3V0S8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
1700012B07RikQ3V0S8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
1700012B07RikQ3V0S8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
1700012B07RikQ3V0S8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
1700012B07RikQ3V0S8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
1700012B07RikQ3V0S8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
1700012B07RikQ3V0S8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
1700012B07RikQ3V0S8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.76■□□□□ 0.91
1700012B07RikQ3V0S8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
1700012B07RikQ3V0S8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
1700012B07RikQ3V0S8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
1700012B07RikQ3V0S8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
1700012B07RikQ3V0S8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms