Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf223Q3UV31 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf223Q3UV31 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf223Q3UV31 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Rnf223Q3UV31 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf223Q3UV31 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf223Q3UV31 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf223Q3UV31 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf223Q3UV31 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rnf223Q3UV31 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC21.84■■□□□ 1.09
Rnf223Q3UV31 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf223Q3UV31 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.83■■□□□ 1.09
Rnf223Q3UV31 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Rnf223Q3UV31 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf223Q3UV31 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rnf223Q3UV31 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf223Q3UV31 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.81■■□□□ 1.08
Rnf223Q3UV31 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf223Q3UV31 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf223Q3UV31 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.81■■□□□ 1.08
Rnf223Q3UV31 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rnf223Q3UV31 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf223Q3UV31 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf223Q3UV31 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf223Q3UV31 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf223Q3UV31 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rnf223Q3UV31 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.79■■□□□ 1.08
Rnf223Q3UV31 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rnf223Q3UV31 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Rnf223Q3UV31 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf223Q3UV31 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.78■■□□□ 1.08
Rnf223Q3UV31 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rnf223Q3UV31 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf223Q3UV31 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf223Q3UV31 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Rnf223Q3UV31 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf223Q3UV31 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rnf223Q3UV31 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Rnf223Q3UV31 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rnf223Q3UV31 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf223Q3UV31 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf223Q3UV31 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf223Q3UV31 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rnf223Q3UV31 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.75■■□□□ 1.07
Rnf223Q3UV31 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.75■■□□□ 1.07
Rnf223Q3UV31 Gm43592-201ENSMUST00000196922 1165 ntBASIC21.75■■□□□ 1.07
Rnf223Q3UV31 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Rnf223Q3UV31 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rnf223Q3UV31 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Rnf223Q3UV31 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf223Q3UV31 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Rnf223Q3UV31 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf223Q3UV31 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.74■■□□□ 1.07
Rnf223Q3UV31 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Rnf223Q3UV31 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf223Q3UV31 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Rnf223Q3UV31 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Rnf223Q3UV31 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.73■■□□□ 1.07
Rnf223Q3UV31 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf223Q3UV31 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rnf223Q3UV31 Gm5921-201ENSMUST00000075898 882 ntBASIC21.72■■□□□ 1.07
Rnf223Q3UV31 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.71■■□□□ 1.07
Rnf223Q3UV31 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Rnf223Q3UV31 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf223Q3UV31 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.7■■□□□ 1.06
Rnf223Q3UV31 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rnf223Q3UV31 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rnf223Q3UV31 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf223Q3UV31 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf223Q3UV31 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf223Q3UV31 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf223Q3UV31 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rnf223Q3UV31 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rnf223Q3UV31 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf223Q3UV31 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf223Q3UV31 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf223Q3UV31 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf223Q3UV31 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rnf223Q3UV31 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf223Q3UV31 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Rnf223Q3UV31 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf223Q3UV31 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.67■■□□□ 1.06
Rnf223Q3UV31 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rnf223Q3UV31 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rnf223Q3UV31 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
Rnf223Q3UV31 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rnf223Q3UV31 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms