Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Fam196aQ3USH1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.97■■□□□ 1.27
Fam196aQ3USH1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Fam196aQ3USH1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Fam196aQ3USH1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Fam196aQ3USH1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Fam196aQ3USH1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.95■■□□□ 1.26
Fam196aQ3USH1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.95■■□□□ 1.26
Fam196aQ3USH1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Fam196aQ3USH1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.94■■□□□ 1.26
Fam196aQ3USH1 Gm7417-201ENSMUST00000192950 473 ntBASIC22.94■■□□□ 1.26
Fam196aQ3USH1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Fam196aQ3USH1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.93■■□□□ 1.26
Fam196aQ3USH1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.93■■□□□ 1.26
Fam196aQ3USH1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Fam196aQ3USH1 Gm9847-201ENSMUST00000052528 599 ntBASIC22.93■■□□□ 1.26
Fam196aQ3USH1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.93■■□□□ 1.26
Fam196aQ3USH1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.92■■□□□ 1.26
Fam196aQ3USH1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Fam196aQ3USH1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.92■■□□□ 1.26
Fam196aQ3USH1 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Fam196aQ3USH1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Fam196aQ3USH1 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.91■■□□□ 1.26
Fam196aQ3USH1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Fam196aQ3USH1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Fam196aQ3USH1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Fam196aQ3USH1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Fam196aQ3USH1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Fam196aQ3USH1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Fam196aQ3USH1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Fam196aQ3USH1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Fam196aQ3USH1 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.88■■□□□ 1.25
Fam196aQ3USH1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Fam196aQ3USH1 Gm21956-201ENSMUST00000179946 522 ntBASIC22.87■■□□□ 1.25
Fam196aQ3USH1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Fam196aQ3USH1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Fam196aQ3USH1 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Fam196aQ3USH1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.85■■□□□ 1.25
Fam196aQ3USH1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Fam196aQ3USH1 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Fam196aQ3USH1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Fam196aQ3USH1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Fam196aQ3USH1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Fam196aQ3USH1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Fam196aQ3USH1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Fam196aQ3USH1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.83■■□□□ 1.25
Fam196aQ3USH1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Fam196aQ3USH1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Fam196aQ3USH1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Fam196aQ3USH1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Fam196aQ3USH1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Fam196aQ3USH1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Fam196aQ3USH1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Fam196aQ3USH1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.81■■□□□ 1.24
Fam196aQ3USH1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Fam196aQ3USH1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Fam196aQ3USH1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Fam196aQ3USH1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.8■■□□□ 1.24
Fam196aQ3USH1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Fam196aQ3USH1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Fam196aQ3USH1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.79■■□□□ 1.24
Fam196aQ3USH1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.79■■□□□ 1.24
Fam196aQ3USH1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Fam196aQ3USH1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
Fam196aQ3USH1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Fam196aQ3USH1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Fam196aQ3USH1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Fam196aQ3USH1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.77■■□□□ 1.23
Fam196aQ3USH1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Fam196aQ3USH1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Fam196aQ3USH1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Fam196aQ3USH1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.76■■□□□ 1.23
Fam196aQ3USH1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Fam196aQ3USH1 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.75■■□□□ 1.23
Fam196aQ3USH1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC22.75■■□□□ 1.23
Fam196aQ3USH1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
Fam196aQ3USH1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Fam196aQ3USH1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Fam196aQ3USH1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.74■■□□□ 1.23
Fam196aQ3USH1 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.74■■□□□ 1.23
Fam196aQ3USH1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Fam196aQ3USH1 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.74■■□□□ 1.23
Fam196aQ3USH1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Fam196aQ3USH1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Fam196aQ3USH1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms