Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccdc190Q3URK1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc190Q3URK1 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc190Q3URK1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc190Q3URK1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccdc190Q3URK1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc190Q3URK1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc190Q3URK1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc190Q3URK1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc190Q3URK1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc190Q3URK1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc190Q3URK1 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.46■□□□□ 0.71
Ccdc190Q3URK1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc190Q3URK1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc190Q3URK1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccdc190Q3URK1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc190Q3URK1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc190Q3URK1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccdc190Q3URK1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Ccdc190Q3URK1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc190Q3URK1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccdc190Q3URK1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc190Q3URK1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc190Q3URK1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc190Q3URK1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc190Q3URK1 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.42■□□□□ 0.7
Ccdc190Q3URK1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc190Q3URK1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Ccdc190Q3URK1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc190Q3URK1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.41■□□□□ 0.7
Ccdc190Q3URK1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc190Q3URK1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc190Q3URK1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc190Q3URK1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc190Q3URK1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccdc190Q3URK1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc190Q3URK1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc190Q3URK1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Particl-201ENSMUST00000205370 1560 ntBASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc190Q3URK1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc190Q3URK1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc190Q3URK1 Gm6821-201ENSMUST00000107540 542 ntBASIC19.36■□□□□ 0.69
Ccdc190Q3URK1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc190Q3URK1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc190Q3URK1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccdc190Q3URK1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc190Q3URK1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc190Q3URK1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc190Q3URK1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccdc190Q3URK1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc190Q3URK1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc190Q3URK1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc190Q3URK1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.33■□□□□ 0.68
Ccdc190Q3URK1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc190Q3URK1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc190Q3URK1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms