Protein–RNA interactions for Protein: Q2VWQ2

Nell1, Protein kinase C-binding protein NELL1, mousemouse

Predictions only

Length 810 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nell1Q2VWQ2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.83■■□□□ 1.09
Nell1Q2VWQ2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nell1Q2VWQ2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nell1Q2VWQ2 Gm14117-201ENSMUST00000122417 843 ntBASIC21.82■■□□□ 1.08
Nell1Q2VWQ2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nell1Q2VWQ2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.82■■□□□ 1.08
Nell1Q2VWQ2 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nell1Q2VWQ2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nell1Q2VWQ2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nell1Q2VWQ2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.79■■□□□ 1.08
Nell1Q2VWQ2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Nell1Q2VWQ2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.79■■□□□ 1.08
Nell1Q2VWQ2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nell1Q2VWQ2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nell1Q2VWQ2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nell1Q2VWQ2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nell1Q2VWQ2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nell1Q2VWQ2 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nell1Q2VWQ2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nell1Q2VWQ2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Nell1Q2VWQ2 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.77■■□□□ 1.08
Nell1Q2VWQ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Nell1Q2VWQ2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nell1Q2VWQ2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.76■■□□□ 1.07
Nell1Q2VWQ2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nell1Q2VWQ2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Nell1Q2VWQ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nell1Q2VWQ2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Nell1Q2VWQ2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.73■■□□□ 1.07
Nell1Q2VWQ2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.73■■□□□ 1.07
Nell1Q2VWQ2 Gm9959-201ENSMUST00000068277 390 ntBASIC21.73■■□□□ 1.07
Nell1Q2VWQ2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.73■■□□□ 1.07
Nell1Q2VWQ2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nell1Q2VWQ2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.72■■□□□ 1.07
Nell1Q2VWQ2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.72■■□□□ 1.07
Nell1Q2VWQ2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.72■■□□□ 1.07
Nell1Q2VWQ2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nell1Q2VWQ2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nell1Q2VWQ2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nell1Q2VWQ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.71■■□□□ 1.07
Nell1Q2VWQ2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.71■■□□□ 1.07
Nell1Q2VWQ2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nell1Q2VWQ2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nell1Q2VWQ2 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Nell1Q2VWQ2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nell1Q2VWQ2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nell1Q2VWQ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nell1Q2VWQ2 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nell1Q2VWQ2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nell1Q2VWQ2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nell1Q2VWQ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Nell1Q2VWQ2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nell1Q2VWQ2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nell1Q2VWQ2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nell1Q2VWQ2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nell1Q2VWQ2 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nell1Q2VWQ2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nell1Q2VWQ2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nell1Q2VWQ2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Nell1Q2VWQ2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.64■■□□□ 1.06
Nell1Q2VWQ2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nell1Q2VWQ2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nell1Q2VWQ2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nell1Q2VWQ2 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nell1Q2VWQ2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nell1Q2VWQ2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nell1Q2VWQ2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nell1Q2VWQ2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nell1Q2VWQ2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nell1Q2VWQ2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nell1Q2VWQ2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nell1Q2VWQ2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nell1Q2VWQ2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nell1Q2VWQ2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms