Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
YBX1P67809 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.01■■□□□ 1.43
YBX1P67809 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
YBX1P67809 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
YBX1P67809 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
YBX1P67809 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24■■□□□ 1.43
YBX1P67809 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24■■□□□ 1.43
YBX1P67809 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
YBX1P67809 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
YBX1P67809 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
YBX1P67809 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
YBX1P67809 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.99■■□□□ 1.43
YBX1P67809 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
YBX1P67809 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
YBX1P67809 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
YBX1P67809 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
YBX1P67809 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
YBX1P67809 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
YBX1P67809 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.98■■□□□ 1.43
YBX1P67809 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
YBX1P67809 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.98■■□□□ 1.43
YBX1P67809 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
YBX1P67809 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
YBX1P67809 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
YBX1P67809 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
YBX1P67809 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
YBX1P67809 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
YBX1P67809 AC091060.1-201ENST00000623524 1766 ntBASIC23.96■■□□□ 1.43
YBX1P67809 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
YBX1P67809 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
YBX1P67809 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.95■■□□□ 1.43
YBX1P67809 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
YBX1P67809 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
YBX1P67809 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
YBX1P67809 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
YBX1P67809 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.95■■□□□ 1.42
YBX1P67809 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
YBX1P67809 WHAMMP3-201ENST00000611636 1609 ntBASIC23.95■■□□□ 1.42
YBX1P67809 AL359258.2-201ENST00000564063 1566 ntBASIC23.95■■□□□ 1.42
YBX1P67809 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.94■■□□□ 1.42
YBX1P67809 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
YBX1P67809 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.94■■□□□ 1.42
YBX1P67809 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.94■■□□□ 1.42
YBX1P67809 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
YBX1P67809 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
YBX1P67809 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
YBX1P67809 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
YBX1P67809 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
YBX1P67809 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
YBX1P67809 AC060814.1-201ENST00000554326 538 ntBASIC23.92■■□□□ 1.42
YBX1P67809 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.92■■□□□ 1.42
YBX1P67809 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
YBX1P67809 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
YBX1P67809 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.91■■□□□ 1.42
YBX1P67809 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
YBX1P67809 AC022413.1-201ENST00000624602 984 ntBASIC23.91■■□□□ 1.42
YBX1P67809 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.91■■□□□ 1.42
YBX1P67809 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
YBX1P67809 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
YBX1P67809 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.9■■□□□ 1.42
YBX1P67809 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
YBX1P67809 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
YBX1P67809 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
YBX1P67809 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
YBX1P67809 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
YBX1P67809 GPX1-201ENST00000419349 1106 ntBASIC23.89■■□□□ 1.41
YBX1P67809 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
YBX1P67809 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
YBX1P67809 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
YBX1P67809 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
YBX1P67809 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.89■■□□□ 1.41
YBX1P67809 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
YBX1P67809 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
YBX1P67809 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.87■■□□□ 1.41
YBX1P67809 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
YBX1P67809 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.87■■□□□ 1.41
YBX1P67809 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.87■■□□□ 1.41
YBX1P67809 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.86■■□□□ 1.41
YBX1P67809 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YBX1P67809 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YBX1P67809 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YBX1P67809 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YBX1P67809 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
YBX1P67809 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
YBX1P67809 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.86■■□□□ 1.41
YBX1P67809 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
YBX1P67809 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
YBX1P67809 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.84■■□□□ 1.41
YBX1P67809 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
YBX1P67809 AL157400.5-201ENST00000507624 621 ntBASIC23.84■■□□□ 1.41
YBX1P67809 HSD17B1P1-201ENST00000590052 955 ntBASIC23.84■■□□□ 1.41
YBX1P67809 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.83■■□□□ 1.41
YBX1P67809 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
YBX1P67809 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
YBX1P67809 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
YBX1P67809 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YBX1P67809 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
YBX1P67809 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
YBX1P67809 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.81■■□□□ 1.4
YBX1P67809 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms