Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.44■□□□□ 0.7
Sec61a1P61620 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a1P61620 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a1P61620 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a1P61620 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.44■□□□□ 0.7
Sec61a1P61620 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a1P61620 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a1P61620 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a1P61620 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a1P61620 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a1P61620 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec61a1P61620 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec61a1P61620 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec61a1P61620 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sec61a1P61620 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec61a1P61620 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sec61a1P61620 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec61a1P61620 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec61a1P61620 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec61a1P61620 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec61a1P61620 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.41■□□□□ 0.7
Sec61a1P61620 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec61a1P61620 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a1P61620 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a1P61620 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec61a1P61620 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sec61a1P61620 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.4■□□□□ 0.7
Sec61a1P61620 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sec61a1P61620 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sec61a1P61620 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a1P61620 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.39■□□□□ 0.69
Sec61a1P61620 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec61a1P61620 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sec61a1P61620 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a1P61620 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a1P61620 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a1P61620 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a1P61620 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Sec61a1P61620 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sec61a1P61620 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sec61a1P61620 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sec61a1P61620 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sec61a1P61620 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sec61a1P61620 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sec61a1P61620 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sec61a1P61620 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sec61a1P61620 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a1P61620 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a1P61620 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a1P61620 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec61a1P61620 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec61a1P61620 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.35■□□□□ 0.69
Sec61a1P61620 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec61a1P61620 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Sec61a1P61620 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Sec61a1P61620 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sec61a1P61620 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.34■□□□□ 0.69
Sec61a1P61620 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.34■□□□□ 0.69
Sec61a1P61620 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sec61a1P61620 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sec61a1P61620 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sec61a1P61620 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sec61a1P61620 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.33■□□□□ 0.69
Sec61a1P61620 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sec61a1P61620 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sec61a1P61620 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sec61a1P61620 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sec61a1P61620 Gm6311-201ENSMUST00000073790 878 ntBASIC19.32■□□□□ 0.68
Sec61a1P61620 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec61a1P61620 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sec61a1P61620 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a1P61620 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a1P61620 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sec61a1P61620 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a1P61620 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.31■□□□□ 0.68
Sec61a1P61620 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a1P61620 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.31■□□□□ 0.68
Sec61a1P61620 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a1P61620 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
Sec61a1P61620 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sec61a1P61620 Gm37136-201ENSMUST00000194368 194 ntBASIC19.3■□□□□ 0.68
Sec61a1P61620 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.3■□□□□ 0.68
Sec61a1P61620 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a1P61620 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a1P61620 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a1P61620 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec61a1P61620 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Sec61a1P61620 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a1P61620 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec61a1P61620 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a1P61620 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec61a1P61620 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sec61a1P61620 Gm11175-201ENSMUST00000116172 543 ntBASIC19.28■□□□□ 0.68
Sec61a1P61620 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms