Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST1H2BDP58876 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2BDP58876 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HIST1H2BDP58876 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2BDP58876 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST1H2BDP58876 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2BDP58876 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST1H2BDP58876 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST1H2BDP58876 AC138932.3-201ENST00000567634 1902 ntBASIC18.64■□□□□ 0.58
HIST1H2BDP58876 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.64■□□□□ 0.58
HIST1H2BDP58876 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.64■□□□□ 0.58
HIST1H2BDP58876 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
HIST1H2BDP58876 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.64■□□□□ 0.57
HIST1H2BDP58876 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2BDP58876 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST1H2BDP58876 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST1H2BDP58876 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2BDP58876 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2BDP58876 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST1H2BDP58876 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HIST1H2BDP58876 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST1H2BDP58876 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HIST1H2BDP58876 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HIST1H2BDP58876 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H2BDP58876 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H2BDP58876 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H2BDP58876 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H2BDP58876 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H2BDP58876 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H2BDP58876 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H2BDP58876 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
HIST1H2BDP58876 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.58■□□□□ 0.57
HIST1H2BDP58876 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H2BDP58876 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST1H2BDP58876 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H2BDP58876 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H2BDP58876 AC010864.1-201ENST00000609407 1511 ntBASIC18.56■□□□□ 0.56
HIST1H2BDP58876 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H2BDP58876 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H2BDP58876 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HIST1H2BDP58876 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.56■□□□□ 0.56
HIST1H2BDP58876 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HIST1H2BDP58876 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 AC022211.4-201ENST00000625094 2161 ntBASIC18.55■□□□□ 0.56
HIST1H2BDP58876 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H2BDP58876 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H2BDP58876 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST1H2BDP58876 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H2BDP58876 DUSP8P5-201ENST00000422884 1815 ntBASIC18.54■□□□□ 0.56
HIST1H2BDP58876 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HIST1H2BDP58876 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST1H2BDP58876 AC097639.1-201ENST00000565519 1891 ntBASIC18.54■□□□□ 0.56
HIST1H2BDP58876 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H2BDP58876 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST1H2BDP58876 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.53■□□□□ 0.56
HIST1H2BDP58876 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms