Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 RDN5-2RDN5-2 119 nt6.87□□□□□ -1.31
VPS9P54787 RDN5-3RDN5-3 119 nt6.87□□□□□ -1.31
VPS9P54787 RDN5-4RDN5-4 119 nt6.87□□□□□ -1.31
VPS9P54787 RDN5-5RDN5-5 119 nt6.87□□□□□ -1.31
VPS9P54787 TMA46YOR091W 1038 nt6.87□□□□□ -1.31
VPS9P54787 SEC62YPL094C 825 nt6.87□□□□□ -1.31
VPS9P54787 SLA2YNL243W 2907 nt6.87□□□□□ -1.31
VPS9P54787 CRH1YGR189C 1524 nt6.86□□□□□ -1.31
VPS9P54787 ERS1YCR075C 783 nt6.86□□□□□ -1.31
VPS9P54787 YDL177CYDL177C 513 nt6.86□□□□□ -1.31
VPS9P54787 ADE17YMR120C 1779 nt6.86□□□□□ -1.31
VPS9P54787 NMD5YJR132W 3147 nt6.86□□□□□ -1.31
VPS9P54787 FET4YMR319C 1659 nt6.86□□□□□ -1.31
VPS9P54787 KIN1YDR122W 3195 nt6.85□□□□□ -1.31
VPS9P54787 RPL2BYIL018W 765 nt6.85□□□□□ -1.31
VPS9P54787 ASF1YJL115W 840 nt6.85□□□□□ -1.31
VPS9P54787 HBN1YCL026C-B 582 nt6.85□□□□□ -1.31
VPS9P54787 NTE1YML059C 5040 nt6.85□□□□□ -1.31
VPS9P54787 CDC13YDL220C 2775 nt6.85□□□□□ -1.31
VPS9P54787 YFL052WYFL052W 1398 nt6.84□□□□□ -1.31
VPS9P54787 LCL3YGL085W 825 nt6.84□□□□□ -1.31
VPS9P54787 MKK1YOR231W 1527 nt6.84□□□□□ -1.31
VPS9P54787 TAH11YJR046W 1815 nt6.83□□□□□ -1.32
VPS9P54787 CMR1YDL156W 1569 nt6.83□□□□□ -1.32
VPS9P54787 LSC1YOR142W 990 nt6.83□□□□□ -1.32
VPS9P54787 HXT13YEL069C 1695 nt6.83□□□□□ -1.32
VPS9P54787 ELP3YPL086C 1674 nt6.83□□□□□ -1.32
VPS9P54787 PPM2YOL141W 2088 nt6.83□□□□□ -1.32
VPS9P54787 CHS5YLR330W 2016 nt6.83□□□□□ -1.32
VPS9P54787 YHR020WYHR020W 2067 nt6.82□□□□□ -1.32
VPS9P54787 YBR241CYBR241C 1467 nt6.82□□□□□ -1.32
VPS9P54787 YFL013W-AYFL013W-A 804 nt6.82□□□□□ -1.32
VPS9P54787 FMO1YHR176W 1299 nt6.82□□□□□ -1.32
VPS9P54787 RNH1YMR234W 1047 nt6.82□□□□□ -1.32
VPS9P54787 TAF9YMR236W 474 nt6.82□□□□□ -1.32
VPS9P54787 YBR113WYBR113W 483 nt6.82□□□□□ -1.32
VPS9P54787 CCT3YJL014W 1605 nt6.82□□□□□ -1.32
VPS9P54787 CYB2YML054C 1776 nt6.82□□□□□ -1.32
VPS9P54787 YKL102CYKL102C 306 nt6.81□□□□□ -1.32
VPS9P54787 GSH1YJL101C 2037 nt6.81□□□□□ -1.32
VPS9P54787 DOT1YDR440W 1749 nt6.8□□□□□ -1.32
VPS9P54787 ATG36YJL185C 882 nt6.8□□□□□ -1.32
VPS9P54787 MRPS18YNL306W 654 nt6.8□□□□□ -1.32
VPS9P54787 PRP2YNR011C 2631 nt6.8□□□□□ -1.32
VPS9P54787 ATF1YOR377W 1578 nt6.8□□□□□ -1.32
VPS9P54787 RGD2YFL047W 2145 nt6.79□□□□□ -1.32
VPS9P54787 COQ1YBR003W 1422 nt6.79□□□□□ -1.32
VPS9P54787 NTG1YAL015C 1200 nt6.79□□□□□ -1.32
VPS9P54787 PUS5YLR165C 765 nt6.79□□□□□ -1.32
VPS9P54787 YNL092WYNL092W 1203 nt6.79□□□□□ -1.32
VPS9P54787 AGP2YBR132C 1791 nt6.79□□□□□ -1.32
VPS9P54787 YFR006WYFR006W 1608 nt6.79□□□□□ -1.32
VPS9P54787 YKL077WYKL077W 1179 nt6.78□□□□□ -1.32
VPS9P54787 SAL1YNL083W 1485 nt6.78□□□□□ -1.32
VPS9P54787 YHK8YHR048W 1545 nt6.77□□□□□ -1.33
VPS9P54787 YIL029W-AYIL029W-A 372 nt6.77□□□□□ -1.33
VPS9P54787 IRC11YOR013W 471 nt6.77□□□□□ -1.33
VPS9P54787 AIM3YBR108W 2844 nt6.77□□□□□ -1.33
VPS9P54787 COX10YPL172C 1389 nt6.77□□□□□ -1.33
VPS9P54787 DAL4YIR028W 1908 nt6.76□□□□□ -1.33
VPS9P54787 YRB2YIL063C 984 nt6.76□□□□□ -1.33
VPS9P54787 MEU1YLR017W 1014 nt6.76□□□□□ -1.33
VPS9P54787 YNL165WYNL165W 1221 nt6.76□□□□□ -1.33
VPS9P54787 HST2YPL015C 1074 nt6.76□□□□□ -1.33
VPS9P54787 ILV6YCL009C 930 nt6.76□□□□□ -1.33
VPS9P54787 MIP1YOR330C 3765 nt6.75□□□□□ -1.33
VPS9P54787 IMG1YCR046C 510 nt6.75□□□□□ -1.33
VPS9P54787 GCG1YER163C 699 nt6.75□□□□□ -1.33
VPS9P54787 MRPL23YOR150W 492 nt6.75□□□□□ -1.33
VPS9P54787 GYP8YFL027C 1494 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)BtG(GCC)B 71 nt6.74□□□□□ -1.33
VPS9P54787 SUF16tG(GCC)C 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)D1tG(GCC)D1 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)D2tG(GCC)D2 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)EtG(GCC)E 71 nt6.74□□□□□ -1.33
VPS9P54787 SUF20tG(GCC)F1 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)F2tG(GCC)F2 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)G1tG(GCC)G1 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)G2tG(GCC)G2 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)J1tG(GCC)J1 71 nt6.74□□□□□ -1.33
VPS9P54787 SUF23tG(GCC)J2 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)MtG(GCC)M 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)O1tG(GCC)O1 71 nt6.74□□□□□ -1.33
VPS9P54787 SUF17tG(GCC)O2 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)P1tG(GCC)P1 71 nt6.74□□□□□ -1.33
VPS9P54787 tG(GCC)P2tG(GCC)P2 71 nt6.74□□□□□ -1.33
VPS9P54787 YHR213W-BYHR213W-B 300 nt6.74□□□□□ -1.33
VPS9P54787 AIM20YIL158W 615 nt6.74□□□□□ -1.33
VPS9P54787 COX16YJL003W 357 nt6.74□□□□□ -1.33
VPS9P54787 GCN3YKR026C 918 nt6.74□□□□□ -1.33
VPS9P54787 YAR064WYAR064W 300 nt6.74□□□□□ -1.33
VPS9P54787 YNR014WYNR014W 639 nt6.74□□□□□ -1.33
VPS9P54787 YOR389WYOR389W 1875 nt6.74□□□□□ -1.33
VPS9P54787 RQC1YDR333C 2172 nt6.74□□□□□ -1.33
VPS9P54787 GAA1YLR088W 1845 nt6.73□□□□□ -1.33
VPS9P54787 STT3YGL022W 2157 nt6.72□□□□□ -1.33
VPS9P54787 PPH22YDL188C 1134 nt6.72□□□□□ -1.33
VPS9P54787 OM45YIL136W 1182 nt6.72□□□□□ -1.33
VPS9P54787 RFC4YOL094C 972 nt6.72□□□□□ -1.33
VPS9P54787 TFC6YDR362C 2019 nt6.72□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms