Protein–RNA interactions for Protein: P52798

EFNA4, Ephrin-A4, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4P52798 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
EFNA4P52798 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFNA4P52798 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.76■□□□□ 0.91
EFNA4P52798 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
EFNA4P52798 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
EFNA4P52798 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
EFNA4P52798 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
EFNA4P52798 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.75■□□□□ 0.91
EFNA4P52798 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.75■□□□□ 0.91
EFNA4P52798 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.75■□□□□ 0.91
EFNA4P52798 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFNA4P52798 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EFNA4P52798 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFNA4P52798 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EFNA4P52798 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.74■□□□□ 0.91
EFNA4P52798 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.74■□□□□ 0.91
EFNA4P52798 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.74■□□□□ 0.91
EFNA4P52798 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EFNA4P52798 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFNA4P52798 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
EFNA4P52798 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EFNA4P52798 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.73■□□□□ 0.91
EFNA4P52798 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFNA4P52798 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFNA4P52798 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EFNA4P52798 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNA4P52798 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EFNA4P52798 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNA4P52798 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNA4P52798 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNA4P52798 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.72■□□□□ 0.91
EFNA4P52798 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
EFNA4P52798 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.71■□□□□ 0.91
EFNA4P52798 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
EFNA4P52798 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.71■□□□□ 0.91
EFNA4P52798 AC010980.1-201ENST00000587192 1142 ntBASIC20.71■□□□□ 0.91
EFNA4P52798 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.71■□□□□ 0.91
EFNA4P52798 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EFNA4P52798 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA4P52798 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.7■□□□□ 0.9
EFNA4P52798 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA4P52798 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.7■□□□□ 0.9
EFNA4P52798 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EFNA4P52798 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA4P52798 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA4P52798 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EFNA4P52798 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA4P52798 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.68■□□□□ 0.9
EFNA4P52798 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA4P52798 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA4P52798 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EFNA4P52798 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EFNA4P52798 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA4P52798 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA4P52798 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.67■□□□□ 0.9
EFNA4P52798 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA4P52798 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA4P52798 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA4P52798 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EFNA4P52798 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.67■□□□□ 0.9
EFNA4P52798 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.66■□□□□ 0.9
EFNA4P52798 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.66■□□□□ 0.9
EFNA4P52798 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EFNA4P52798 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA4P52798 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EFNA4P52798 KRT8P33-201ENST00000508125 1423 ntBASIC20.65■□□□□ 0.9
EFNA4P52798 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EFNA4P52798 YBX1P4-201ENST00000392794 808 ntBASIC20.65■□□□□ 0.9
EFNA4P52798 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.65■□□□□ 0.9
EFNA4P52798 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.65■□□□□ 0.9
EFNA4P52798 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
EFNA4P52798 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.64■□□□□ 0.9
EFNA4P52798 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFNA4P52798 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.64■□□□□ 0.89
EFNA4P52798 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
EFNA4P52798 AL035685.1-201ENST00000636663 812 ntBASIC20.64■□□□□ 0.89
EFNA4P52798 DRD5P2-201ENST00000421395 2012 ntBASIC20.64■□□□□ 0.89
EFNA4P52798 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EFNA4P52798 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
EFNA4P52798 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EFNA4P52798 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EFNA4P52798 AL451085.2-201ENST00000605085 799 ntBASIC20.63■□□□□ 0.89
EFNA4P52798 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
EFNA4P52798 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFNA4P52798 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.62■□□□□ 0.89
EFNA4P52798 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFNA4P52798 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFNA4P52798 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
EFNA4P52798 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EFNA4P52798 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFNA4P52798 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EFNA4P52798 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.61■□□□□ 0.89
EFNA4P52798 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.61■□□□□ 0.89
EFNA4P52798 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.61■□□□□ 0.89
EFNA4P52798 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
EFNA4P52798 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EFNA4P52798 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.61■□□□□ 0.89
EFNA4P52798 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EFNA4P52798 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
EFNA4P52798 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms