Protein–RNA interactions for Protein: P51676

Ccr1l1, C-C chemokine receptor 1-like protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr1l1P51676 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Ccr1l1P51676 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1l1P51676 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1l1P51676 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1l1P51676 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.14■□□□□ 0.81
Ccr1l1P51676 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1l1P51676 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccr1l1P51676 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr1l1P51676 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.13■□□□□ 0.81
Ccr1l1P51676 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr1l1P51676 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Ccr1l1P51676 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ccr1l1P51676 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Ccr1l1P51676 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1l1P51676 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr1l1P51676 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccr1l1P51676 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Ccr1l1P51676 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccr1l1P51676 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccr1l1P51676 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
Ccr1l1P51676 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr1l1P51676 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr1l1P51676 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr1l1P51676 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr1l1P51676 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccr1l1P51676 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccr1l1P51676 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Ccr1l1P51676 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Ccr1l1P51676 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccr1l1P51676 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Ccr1l1P51676 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccr1l1P51676 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccr1l1P51676 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccr1l1P51676 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccr1l1P51676 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.06■□□□□ 0.8
Ccr1l1P51676 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr1l1P51676 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ccr1l1P51676 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccr1l1P51676 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.05■□□□□ 0.8
Ccr1l1P51676 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr1l1P51676 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr1l1P51676 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr1l1P51676 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Ccr1l1P51676 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Gm27502-201ENSMUST00000183495 199 ntBASIC20.03■□□□□ 0.8
Ccr1l1P51676 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.03■□□□□ 0.8
Ccr1l1P51676 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.03■□□□□ 0.8
Ccr1l1P51676 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr1l1P51676 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccr1l1P51676 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccr1l1P51676 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccr1l1P51676 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Gm14523-201ENSMUST00000117260 558 ntBASIC20.01■□□□□ 0.79
Ccr1l1P51676 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr1l1P51676 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccr1l1P51676 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20■□□□□ 0.79
Ccr1l1P51676 Gm12366-201ENSMUST00000121722 873 ntBASIC20■□□□□ 0.79
Ccr1l1P51676 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20■□□□□ 0.79
Ccr1l1P51676 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccr1l1P51676 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccr1l1P51676 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccr1l1P51676 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20■□□□□ 0.79
Ccr1l1P51676 Gm5786-201ENSMUST00000085368 882 ntBASIC20■□□□□ 0.79
Ccr1l1P51676 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccr1l1P51676 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr1l1P51676 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr1l1P51676 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms