Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CDC34P49427 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC34P49427 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CDC34P49427 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CDC34P49427 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC34P49427 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDC34P49427 AL391121.1-201ENST00000607967 1349 ntBASIC19.23■□□□□ 0.67
CDC34P49427 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CDC34P49427 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CDC34P49427 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
CDC34P49427 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC34P49427 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC34P49427 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CDC34P49427 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CDC34P49427 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC34P49427 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CDC34P49427 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.21■□□□□ 0.67
CDC34P49427 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC34P49427 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC34P49427 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CDC34P49427 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC34P49427 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CDC34P49427 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CDC34P49427 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC34P49427 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDC34P49427 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDC34P49427 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CDC34P49427 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC34P49427 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC34P49427 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CDC34P49427 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.18■□□□□ 0.66
CDC34P49427 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDC34P49427 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC34P49427 AC010501.1-201ENST00000606270 1962 ntBASIC19.18■□□□□ 0.66
CDC34P49427 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC34P49427 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDC34P49427 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC34P49427 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC34P49427 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC34P49427 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.17■□□□□ 0.66
CDC34P49427 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.17■□□□□ 0.66
CDC34P49427 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDC34P49427 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDC34P49427 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
CDC34P49427 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDC34P49427 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC34P49427 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.16■□□□□ 0.66
CDC34P49427 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC34P49427 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDC34P49427 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CDC34P49427 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC34P49427 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC34P49427 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC34P49427 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.15■□□□□ 0.66
CDC34P49427 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDC34P49427 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.15■□□□□ 0.66
CDC34P49427 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC34P49427 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDC34P49427 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDC34P49427 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CDC34P49427 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.14■□□□□ 0.66
CDC34P49427 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.14■□□□□ 0.65
CDC34P49427 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.14■□□□□ 0.65
CDC34P49427 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CDC34P49427 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC34P49427 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC34P49427 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC34P49427 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CDC34P49427 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CDC34P49427 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC34P49427 LINC00273-201ENST00000539813 1452 ntBASIC19.13■□□□□ 0.65
CDC34P49427 AL139125.2-201ENST00000623134 1869 ntBASIC19.13■□□□□ 0.65
CDC34P49427 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.13■□□□□ 0.65
CDC34P49427 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.13■□□□□ 0.65
CDC34P49427 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC34P49427 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC34P49427 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CDC34P49427 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CDC34P49427 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CDC34P49427 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.12■□□□□ 0.65
CDC34P49427 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CDC34P49427 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CDC34P49427 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CDC34P49427 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CDC34P49427 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms