Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 TRS31YDR472W 852 nt9.95□□□□□ -0.82
TY1B-JR1P47098 MTC2YKL098W 1074 nt9.95□□□□□ -0.82
TY1B-JR1P47098 YHR020WYHR020W 2067 nt9.95□□□□□ -0.82
TY1B-JR1P47098 MAE1YKL029C 2010 nt9.95□□□□□ -0.82
TY1B-JR1P47098 MAK31YCR020C-A 267 nt9.94□□□□□ -0.82
TY1B-JR1P47098 CDC19YAL038W 1503 nt9.94□□□□□ -0.82
TY1B-JR1P47098 RPE1YJL121C 717 nt9.93□□□□□ -0.82
TY1B-JR1P47098 YPL257WYPL257W 582 nt9.93□□□□□ -0.82
TY1B-JR1P47098 YET3YDL072C 612 nt9.93□□□□□ -0.82
TY1B-JR1P47098 YDL177CYDL177C 513 nt9.93□□□□□ -0.82
TY1B-JR1P47098 FAL1YDR021W 1200 nt9.92□□□□□ -0.82
TY1B-JR1P47098 STT3YGL022W 2157 nt9.91□□□□□ -0.82
TY1B-JR1P47098 YBR241CYBR241C 1467 nt9.91□□□□□ -0.82
TY1B-JR1P47098 ATG36YJL185C 882 nt9.91□□□□□ -0.82
TY1B-JR1P47098 MDE1YJR024C 735 nt9.9□□□□□ -0.82
TY1B-JR1P47098 TMA46YOR091W 1038 nt9.9□□□□□ -0.82
TY1B-JR1P47098 HSV2YGR223C 1347 nt9.9□□□□□ -0.82
TY1B-JR1P47098 CEM1YER061C 1329 nt9.88□□□□□ -0.83
TY1B-JR1P47098 YJR154WYJR154W 1041 nt9.88□□□□□ -0.83
TY1B-JR1P47098 CTF19YPL018W 1110 nt9.88□□□□□ -0.83
TY1B-JR1P47098 TUF1YOR187W 1314 nt9.88□□□□□ -0.83
TY1B-JR1P47098 SKS1YPL026C 1509 nt9.87□□□□□ -0.83
TY1B-JR1P47098 HST3YOR025W 1344 nt9.87□□□□□ -0.83
TY1B-JR1P47098 ADY2YCR010C 852 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)BtG(GCC)B 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 SUF16tG(GCC)C 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)D1tG(GCC)D1 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)D2tG(GCC)D2 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)EtG(GCC)E 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 SUF20tG(GCC)F1 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)F2tG(GCC)F2 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)G1tG(GCC)G1 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)G2tG(GCC)G2 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)J1tG(GCC)J1 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 SUF23tG(GCC)J2 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)MtG(GCC)M 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)O1tG(GCC)O1 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 SUF17tG(GCC)O2 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)P1tG(GCC)P1 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 tG(GCC)P2tG(GCC)P2 71 nt9.87□□□□□ -0.83
TY1B-JR1P47098 SKG1YKR100C 1068 nt9.87□□□□□ -0.83
TY1B-JR1P47098 AMD2YDR242W 1650 nt9.86□□□□□ -0.83
TY1B-JR1P47098 RPS5YJR123W 678 nt9.86□□□□□ -0.83
TY1B-JR1P47098 SSP120YLR250W 705 nt9.86□□□□□ -0.83
TY1B-JR1P47098 MIX17YMR002W 471 nt9.86□□□□□ -0.83
TY1B-JR1P47098 ISN1YOR155C 1353 nt9.84□□□□□ -0.83
TY1B-JR1P47098 RHB1YCR027C 630 nt9.84□□□□□ -0.83
TY1B-JR1P47098 RPP1YHR062C 882 nt9.84□□□□□ -0.83
TY1B-JR1P47098 CCC2YDR270W 3015 nt9.84□□□□□ -0.83
TY1B-JR1P47098 TDP1YBR223C 1635 nt9.83□□□□□ -0.84
TY1B-JR1P47098 RFS1YBR052C 633 nt9.83□□□□□ -0.84
TY1B-JR1P47098 YJR146WYJR146W 354 nt9.83□□□□□ -0.84
TY1B-JR1P47098 GTO3YMR251W 1101 nt9.82□□□□□ -0.84
TY1B-JR1P47098 KTR3YBR205W 1215 nt9.82□□□□□ -0.84
TY1B-JR1P47098 MRPL28YDR462W 444 nt9.81□□□□□ -0.84
TY1B-JR1P47098 GAT4YIR013C 366 nt9.81□□□□□ -0.84
TY1B-JR1P47098 RUF23RUF23 254 nt9.81□□□□□ -0.84
TY1B-JR1P47098 snR82snR82 268 nt9.8□□□□□ -0.84
TY1B-JR1P47098 YJR084WYJR084W 1272 nt9.8□□□□□ -0.84
TY1B-JR1P47098 PRS2YER099C 957 nt9.8□□□□□ -0.84
TY1B-JR1P47098 SPT3YDR392W 1014 nt9.79□□□□□ -0.84
TY1B-JR1P47098 CAF40YNL288W 1122 nt9.79□□□□□ -0.84
TY1B-JR1P47098 PPT1YGR123C 1542 nt9.79□□□□□ -0.84
TY1B-JR1P47098 CRF1YDR223W 1404 nt9.79□□□□□ -0.84
TY1B-JR1P47098 HRQ1YDR291W 3234 nt9.78□□□□□ -0.84
TY1B-JR1P47098 PAC2YER007W 1557 nt9.77□□□□□ -0.84
TY1B-JR1P47098 BUG1YDL099W 1026 nt9.77□□□□□ -0.85
TY1B-JR1P47098 JNM1YMR294W 1122 nt9.77□□□□□ -0.85
TY1B-JR1P47098 YNL042W-BYNL042W-B 258 nt9.77□□□□□ -0.85
TY1B-JR1P47098 RFC4YOL094C 972 nt9.77□□□□□ -0.85
TY1B-JR1P47098 COX10YPL172C 1389 nt9.76□□□□□ -0.85
TY1B-JR1P47098 ICL1YER065C 1674 nt9.75□□□□□ -0.85
TY1B-JR1P47098 MAL31YBR298C 1845 nt9.75□□□□□ -0.85
TY1B-JR1P47098 YFL013W-AYFL013W-A 804 nt9.74□□□□□ -0.85
TY1B-JR1P47098 YPR160C-AYPR160C-A 285 nt9.74□□□□□ -0.85
TY1B-JR1P47098 FLC2YAL053W 2352 nt9.73□□□□□ -0.85
TY1B-JR1P47098 MRP17YKL003C 396 nt9.73□□□□□ -0.85
TY1B-JR1P47098 AIM33YML087C 939 nt9.73□□□□□ -0.85
TY1B-JR1P47098 ARG1YOL058W 1263 nt9.73□□□□□ -0.85
TY1B-JR1P47098 LDB18YLL049W 540 nt9.72□□□□□ -0.85
TY1B-JR1P47098 YOR342CYOR342C 960 nt9.72□□□□□ -0.85
TY1B-JR1P47098 EDE1YBL047C 4146 nt9.72□□□□□ -0.85
TY1B-JR1P47098 ILV1YER086W 1731 nt9.71□□□□□ -0.85
TY1B-JR1P47098 RMD8YFR048W 1989 nt9.71□□□□□ -0.86
TY1B-JR1P47098 YDL022C-AYDL022C-A 249 nt9.7□□□□□ -0.86
TY1B-JR1P47098 DFR1YOR236W 636 nt9.7□□□□□ -0.86
TY1B-JR1P47098 SNT309YPR101W 528 nt9.7□□□□□ -0.86
TY1B-JR1P47098 ADE12YNL220W 1302 nt9.69□□□□□ -0.86
TY1B-JR1P47098 LDB16YCL005W 771 nt9.69□□□□□ -0.86
TY1B-JR1P47098 YML012C-AYML012C-A 378 nt9.68□□□□□ -0.86
TY1B-JR1P47098 AQR1YNL065W 1761 nt9.68□□□□□ -0.86
TY1B-JR1P47098 YKR018CYKR018C 2178 nt9.68□□□□□ -0.86
TY1B-JR1P47098 YDL119CYDL119C 924 nt9.68□□□□□ -0.86
TY1B-JR1P47098 RPS3YNL178W 723 nt9.68□□□□□ -0.86
TY1B-JR1P47098 ENB1YOL158C 1821 nt9.68□□□□□ -0.86
TY1B-JR1P47098 RPR2YIR015W 435 nt9.67□□□□□ -0.86
TY1B-JR1P47098 SFP1YLR403W 2052 nt9.66□□□□□ -0.86
TY1B-JR1P47098 COX20YDR231C 618 nt9.65□□□□□ -0.86
TY1B-JR1P47098 CAN1YEL063C 1773 nt9.65□□□□□ -0.86
TY1B-JR1P47098 OPI11YPR044C 354 nt9.65□□□□□ -0.87
Retrieved 100 of 7,029 protein–RNA pairs in 7.6 ms