Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2AP42771 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2AP42771 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2AP42771 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDKN2AP42771 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.93■■□□□ 1.1
CDKN2AP42771 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CDKN2AP42771 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKN2AP42771 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CDKN2AP42771 AC148477.6-201ENST00000623746 465 ntBASIC21.92■■□□□ 1.1
CDKN2AP42771 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKN2AP42771 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.92■■□□□ 1.1
CDKN2AP42771 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.92■■□□□ 1.1
CDKN2AP42771 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN2AP42771 HLA-V-202ENST00000446817 847 ntBASIC21.91■■□□□ 1.1
CDKN2AP42771 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CDKN2AP42771 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CDKN2AP42771 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2AP42771 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
CDKN2AP42771 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2AP42771 AC020928.2-201ENST00000588717 2197 ntBASIC21.9■■□□□ 1.1
CDKN2AP42771 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CDKN2AP42771 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
CDKN2AP42771 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDKN2AP42771 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
CDKN2AP42771 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDKN2AP42771 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CDKN2AP42771 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CDKN2AP42771 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.89■■□□□ 1.09
CDKN2AP42771 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CDKN2AP42771 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CDKN2AP42771 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.88■■□□□ 1.09
CDKN2AP42771 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.88■■□□□ 1.09
CDKN2AP42771 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.88■■□□□ 1.09
CDKN2AP42771 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CDKN2AP42771 AC135731.1-201ENST00000569415 2548 ntBASIC21.87■■□□□ 1.09
CDKN2AP42771 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2AP42771 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2AP42771 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CDKN2AP42771 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.87■■□□□ 1.09
CDKN2AP42771 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN2AP42771 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKN2AP42771 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDKN2AP42771 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.86■■□□□ 1.09
CDKN2AP42771 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CDKN2AP42771 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2AP42771 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2AP42771 ABHD17AP4-201ENST00000411545 909 ntBASIC21.85■■□□□ 1.09
CDKN2AP42771 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
CDKN2AP42771 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDKN2AP42771 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN2AP42771 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN2AP42771 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDKN2AP42771 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.84■■□□□ 1.09
CDKN2AP42771 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.84■■□□□ 1.09
CDKN2AP42771 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.84■■□□□ 1.09
CDKN2AP42771 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.84■■□□□ 1.09
CDKN2AP42771 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2AP42771 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDKN2AP42771 ERN1-208ENST00000606895 2068 ntBASIC21.83■■□□□ 1.09
CDKN2AP42771 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.83■■□□□ 1.09
CDKN2AP42771 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDKN2AP42771 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN2AP42771 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN2AP42771 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN2AP42771 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN2AP42771 CR559946.2-201ENST00000623684 991 ntBASIC21.82■■□□□ 1.08
CDKN2AP42771 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDKN2AP42771 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDKN2AP42771 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN2AP42771 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN2AP42771 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN2AP42771 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN2AP42771 AL359258.2-201ENST00000564063 1566 ntBASIC21.81■■□□□ 1.08
CDKN2AP42771 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN2AP42771 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDKN2AP42771 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.81■■□□□ 1.08
CDKN2AP42771 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.8■■□□□ 1.08
CDKN2AP42771 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKN2AP42771 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDKN2AP42771 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.8■■□□□ 1.08
CDKN2AP42771 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.8■■□□□ 1.08
CDKN2AP42771 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDKN2AP42771 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDKN2AP42771 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDKN2AP42771 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDKN2AP42771 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms