Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SAA4P35542 AC093536.1-201ENST00000569153 554 ntBASIC19.93■□□□□ 0.78
SAA4P35542 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.93■□□□□ 0.78
SAA4P35542 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SAA4P35542 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SAA4P35542 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAA4P35542 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAA4P35542 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAA4P35542 KRT18P60-201ENST00000312876 1297 ntBASIC19.92■□□□□ 0.78
SAA4P35542 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SAA4P35542 AC133552.2-201ENST00000619106 1032 ntBASIC19.92■□□□□ 0.78
SAA4P35542 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SAA4P35542 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SAA4P35542 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.91■□□□□ 0.78
SAA4P35542 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.91■□□□□ 0.78
SAA4P35542 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA4P35542 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SAA4P35542 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.91■□□□□ 0.78
SAA4P35542 AC026202.3-201ENST00000600805 1127 ntBASIC19.91■□□□□ 0.78
SAA4P35542 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.91■□□□□ 0.78
SAA4P35542 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SAA4P35542 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA4P35542 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SAA4P35542 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SAA4P35542 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
SAA4P35542 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SAA4P35542 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SAA4P35542 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.89■□□□□ 0.77
SAA4P35542 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.89■□□□□ 0.77
SAA4P35542 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA4P35542 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA4P35542 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SAA4P35542 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
SAA4P35542 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.88■□□□□ 0.77
SAA4P35542 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA4P35542 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SAA4P35542 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SAA4P35542 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.88■□□□□ 0.77
SAA4P35542 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SAA4P35542 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAA4P35542 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SAA4P35542 AL592293.1-201ENST00000502889 1188 ntBASIC19.87■□□□□ 0.77
SAA4P35542 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC19.87■□□□□ 0.77
SAA4P35542 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SAA4P35542 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.86■□□□□ 0.77
SAA4P35542 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SAA4P35542 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SAA4P35542 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SAA4P35542 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SAA4P35542 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.86■□□□□ 0.77
SAA4P35542 RAP2CP1-202ENST00000605179 643 ntBASIC19.86■□□□□ 0.77
SAA4P35542 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SAA4P35542 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SAA4P35542 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.86■□□□□ 0.77
SAA4P35542 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
SAA4P35542 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SAA4P35542 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.85■□□□□ 0.77
SAA4P35542 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SAA4P35542 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA4P35542 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA4P35542 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SAA4P35542 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA4P35542 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SAA4P35542 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.83■□□□□ 0.76
SAA4P35542 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SAA4P35542 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SAA4P35542 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SAA4P35542 AL033527.3-201ENST00000566366 1196 ntBASIC19.82■□□□□ 0.76
SAA4P35542 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SAA4P35542 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.82■□□□□ 0.76
SAA4P35542 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SAA4P35542 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA4P35542 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA4P35542 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA4P35542 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA4P35542 TSPY13P-201ENST00000338964 914 ntBASIC19.81■□□□□ 0.76
SAA4P35542 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SAA4P35542 AC004987.1-201ENST00000428627 508 ntBASIC19.81■□□□□ 0.76
SAA4P35542 ATP5G2P3-201ENST00000429083 425 ntBASIC19.81■□□□□ 0.76
SAA4P35542 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SAA4P35542 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.81■□□□□ 0.76
SAA4P35542 AC129492.7-201ENST00000622992 756 ntBASIC19.81■□□□□ 0.76
SAA4P35542 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SAA4P35542 AC142472.1-201ENST00000612013 1741 ntBASIC19.81■□□□□ 0.76
SAA4P35542 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SAA4P35542 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SAA4P35542 AP004609.3-201ENST00000610705 1884 ntBASIC19.8■□□□□ 0.76
SAA4P35542 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAA4P35542 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.8■□□□□ 0.76
SAA4P35542 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SAA4P35542 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SAA4P35542 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SAA4P35542 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SAA4P35542 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SAA4P35542 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA4P35542 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA4P35542 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SAA4P35542 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SAA4P35542 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.78■□□□□ 0.76
SAA4P35542 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms