Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LCN1P31025 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.64■■□□□ 1.21
LCN1P31025 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LCN1P31025 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
LCN1P31025 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LCN1P31025 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LCN1P31025 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
LCN1P31025 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LCN1P31025 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LCN1P31025 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.62■■□□□ 1.21
LCN1P31025 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LCN1P31025 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
LCN1P31025 AC060814.1-201ENST00000554326 538 ntBASIC22.62■■□□□ 1.21
LCN1P31025 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
LCN1P31025 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
LCN1P31025 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LCN1P31025 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LCN1P31025 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.61■■□□□ 1.21
LCN1P31025 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LCN1P31025 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LCN1P31025 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LCN1P31025 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LCN1P31025 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.6■■□□□ 1.21
LCN1P31025 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
LCN1P31025 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LCN1P31025 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LCN1P31025 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.59■■□□□ 1.21
LCN1P31025 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LCN1P31025 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LCN1P31025 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
LCN1P31025 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
LCN1P31025 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LCN1P31025 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LCN1P31025 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.58■■□□□ 1.21
LCN1P31025 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LCN1P31025 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LCN1P31025 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LCN1P31025 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.57■■□□□ 1.2
LCN1P31025 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
LCN1P31025 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LCN1P31025 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LCN1P31025 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LCN1P31025 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.56■■□□□ 1.2
LCN1P31025 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.56■■□□□ 1.2
LCN1P31025 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LCN1P31025 AL359504.2-201ENST00000605506 1601 ntBASIC22.56■■□□□ 1.2
LCN1P31025 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.55■■□□□ 1.2
LCN1P31025 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 AC092296.2-201ENST00000589470 999 ntBASIC22.55■■□□□ 1.2
LCN1P31025 AC022413.1-201ENST00000624602 984 ntBASIC22.55■■□□□ 1.2
LCN1P31025 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LCN1P31025 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.54■■□□□ 1.2
LCN1P31025 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
LCN1P31025 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.54■■□□□ 1.2
LCN1P31025 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
LCN1P31025 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.53■■□□□ 1.2
LCN1P31025 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
LCN1P31025 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LCN1P31025 ECEL1P2-201ENST00000461596 1295 ntBASIC22.53■■□□□ 1.2
LCN1P31025 AL157400.5-201ENST00000507624 621 ntBASIC22.53■■□□□ 1.2
LCN1P31025 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.53■■□□□ 1.2
LCN1P31025 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.53■■□□□ 1.2
LCN1P31025 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCN1P31025 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCN1P31025 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCN1P31025 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
LCN1P31025 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.52■■□□□ 1.2
LCN1P31025 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.52■■□□□ 1.2
LCN1P31025 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
LCN1P31025 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.52■■□□□ 1.2
LCN1P31025 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCN1P31025 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCN1P31025 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
LCN1P31025 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCN1P31025 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCN1P31025 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.51■■□□□ 1.19
LCN1P31025 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LCN1P31025 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.51■■□□□ 1.19
LCN1P31025 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.51■■□□□ 1.19
LCN1P31025 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
LCN1P31025 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
LCN1P31025 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
LCN1P31025 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.5■■□□□ 1.19
LCN1P31025 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.5■■□□□ 1.19
LCN1P31025 AC025884.2-201ENST00000553429 711 ntBASIC22.5■■□□□ 1.19
LCN1P31025 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.5■■□□□ 1.19
LCN1P31025 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
LCN1P31025 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms