Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cbx3P23198 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cbx3P23198 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cbx3P23198 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cbx3P23198 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cbx3P23198 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cbx3P23198 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cbx3P23198 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Cbx3P23198 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cbx3P23198 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cbx3P23198 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Cbx3P23198 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cbx3P23198 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cbx3P23198 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cbx3P23198 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cbx3P23198 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.13■□□□□ 0.81
Cbx3P23198 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cbx3P23198 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cbx3P23198 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cbx3P23198 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cbx3P23198 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cbx3P23198 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cbx3P23198 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbx3P23198 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.11■□□□□ 0.81
Cbx3P23198 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbx3P23198 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.11■□□□□ 0.81
Cbx3P23198 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cbx3P23198 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbx3P23198 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cbx3P23198 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cbx3P23198 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cbx3P23198 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cbx3P23198 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cbx3P23198 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cbx3P23198 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cbx3P23198 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cbx3P23198 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cbx3P23198 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cbx3P23198 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cbx3P23198 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cbx3P23198 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cbx3P23198 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cbx3P23198 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cbx3P23198 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cbx3P23198 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cbx3P23198 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cbx3P23198 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cbx3P23198 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cbx3P23198 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cbx3P23198 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cbx3P23198 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cbx3P23198 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cbx3P23198 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cbx3P23198 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cbx3P23198 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cbx3P23198 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cbx3P23198 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cbx3P23198 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cbx3P23198 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cbx3P23198 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Cbx3P23198 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cbx3P23198 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cbx3P23198 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cbx3P23198 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cbx3P23198 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Cbx3P23198 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cbx3P23198 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cbx3P23198 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cbx3P23198 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cbx3P23198 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cbx3P23198 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.04■□□□□ 0.8
Cbx3P23198 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.04■□□□□ 0.8
Cbx3P23198 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cbx3P23198 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Cbx3P23198 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cbx3P23198 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.03■□□□□ 0.8
Cbx3P23198 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cbx3P23198 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.03■□□□□ 0.8
Cbx3P23198 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.03■□□□□ 0.8
Cbx3P23198 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cbx3P23198 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cbx3P23198 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cbx3P23198 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Cbx3P23198 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Cbx3P23198 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Cbx3P23198 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cbx3P23198 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cbx3P23198 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Cbx3P23198 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cbx3P23198 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20■□□□□ 0.79
Cbx3P23198 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Cbx3P23198 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cbx3P23198 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cbx3P23198 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cbx3P23198 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cbx3P23198 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cbx3P23198 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.99■□□□□ 0.79
Cbx3P23198 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cbx3P23198 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cbx3P23198 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms