Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.021e-6■■■■□ 24
TROVE2P10155 TBC1D22A-207ENST00000441162 2636 ntTSL 214.4□□□□□ -0.11e-6■■■■□ 24
TROVE2P10155 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.58□□□□□ -0.241e-6■■■■□ 24
TROVE2P10155 Y_RNA.386-201ENST00000383913 105 ntBASIC-3.21□□□□□ -2.926e-23■■■■□ 23.9
TROVE2P10155 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.96e-12■■■■□ 23.7
TROVE2P10155 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.26■□□□□ 0.673e-6■■■■□ 23.6
TROVE2P10155 NKD1-203ENST00000566396 748 ntTSL 311.89□□□□□ -0.513e-8■■■■□ 23.3
TROVE2P10155 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.59e-10■■■■□ 23.3
TROVE2P10155 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.39e-10■■■■□ 23.3
TROVE2P10155 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.12■□□□□ 0.019e-10■■■■□ 23.3
TROVE2P10155 PLAUR-202ENST00000339082 1254 ntTSL 1 (best) BASIC10.97□□□□□ -0.659e-10■■■■□ 23.3
TROVE2P10155 PLAUR-205ENST00000593447 715 ntTSL 36.75□□□□□ -1.339e-10■■■■□ 23.3
TROVE2P10155 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.893e-9■■■■□ 23.2
TROVE2P10155 AC004801.4-201ENST00000546738 3112 ntTSL 2 BASIC11.84□□□□□ -0.511e-18■■■■□ 23.2
TROVE2P10155 HOXC10-205ENST00000515593 526 ntTSL 48.36□□□□□ -1.071e-23■■■■□ 23.2
TROVE2P10155 SNTB2-203ENST00000467311 1489 ntTSL 1 (best)20.93■□□□□ 0.943e-17■■■■□ 23.1
TROVE2P10155 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.713e-17■■■■□ 23.1
TROVE2P10155 SNTB2-205ENST00000525632 536 ntTSL 312.39□□□□□ -0.433e-17■■■■□ 23.1
TROVE2P10155 SNTB2-204ENST00000524887 537 ntTSL 312.39□□□□□ -0.433e-17■■■■□ 23.1
TROVE2P10155 SNTB2-202ENST00000360496 415 ntTSL 212.29□□□□□ -0.443e-17■■■■□ 23.1
TROVE2P10155 SNTB2-206ENST00000528525 448 ntTSL 36.79□□□□□ -1.323e-17■■■■□ 23.1
TROVE2P10155 UTP4-210ENST00000567287 366 ntTSL 36.16□□□□□ -1.423e-17■■■■□ 23.1
TROVE2P10155 MIR19A-201ENST00000384878 82 ntBASIC2.26□□□□□ -2.053e-17■■■■□ 23.1
TROVE2P10155 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.21□□□□□ -2.443e-17■■■■□ 23.1
TROVE2P10155 ARHGEF16-207ENST00000485984 2340 ntTSL 218.5■□□□□ 0.554e-13■■■■□ 22.9
TROVE2P10155 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.63■□□□□ 0.414e-13■■■■□ 22.9
TROVE2P10155 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.14■□□□□ 0.174e-13■■■■□ 22.9
TROVE2P10155 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.154e-13■■■■□ 22.9
TROVE2P10155 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.91■■□□□ 1.92e-6■■■■□ 22.7
TROVE2P10155 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.412e-6■■■■□ 22.7
TROVE2P10155 MICALL2-208ENST00000472100 5248 ntTSL 219.75■□□□□ 0.756e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-217ENST00000568597 592 ntTSL 218.22■□□□□ 0.516e-9■■■■□ 22.6
TROVE2P10155 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.516e-9■■■■□ 22.6
TROVE2P10155 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.376e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-219ENST00000568963 480 ntTSL 416.18■□□□□ 0.186e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.18■□□□□ 0.186e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.78■□□□□ 0.126e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-215ENST00000567523 1839 ntTSL 215.39■□□□□ 0.056e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.18■□□□□ 0.026e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-220ENST00000569076 557 ntTSL 414.11□□□□□ -0.156e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-211ENST00000566184 493 ntTSL 412.94□□□□□ -0.346e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-203ENST00000563000 622 ntTSL 412.67□□□□□ -0.386e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-213ENST00000566801 338 ntTSL 412.35□□□□□ -0.436e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-216ENST00000567740 1051 ntTSL 210.24□□□□□ -0.776e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC10.13□□□□□ -0.796e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-201ENST00000220531 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.796e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC9.67□□□□□ -0.866e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-210ENST00000565727 599 ntTSL 26.84□□□□□ -1.316e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.73□□□□□ -1.336e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-204ENST00000563160 581 ntTSL 43.08□□□□□ -1.926e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.54□□□□□ -26e-9■■■■□ 22.6
TROVE2P10155 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.38□□□□□ -2.036e-9■■■■□ 22.6
TROVE2P10155 Y_RNA.146-201ENST00000363549 102 ntBASIC0.34□□□□□ -2.366e-9■■■■□ 22.6
TROVE2P10155 MIR194-2HG-201ENST00000413053 3647 ntTSL 2 BASIC12.67□□□□□ -0.381e-6■■■■□ 22.5
TROVE2P10155 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.15■□□□□ 0.664e-9■■■■□ 22.4
TROVE2P10155 HIKESHI-202ENST00000528004 1409 ntTSL 216.09■□□□□ 0.174e-9■■■■□ 22.4
TROVE2P10155 HIKESHI-205ENST00000531485 715 ntTSL 213.91□□□□□ -0.184e-9■■■■□ 22.4
TROVE2P10155 HIKESHI-206ENST00000532270 724 ntTSL 211.56□□□□□ -0.564e-9■■■■□ 22.4
TROVE2P10155 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.344e-9■■■■□ 22.4
TROVE2P10155 HIKESHI-204ENST00000530208 799 ntTSL 23.73□□□□□ -1.814e-9■■■■□ 22.4
TROVE2P10155 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.35□□□□□ -2.034e-9■■■■□ 22.4
TROVE2P10155 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.572e-7■■■■□ 22.4
TROVE2P10155 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.15■□□□□ 0.52e-7■■■■□ 22.4
TROVE2P10155 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.49■□□□□ 0.392e-7■■■■□ 22.4
TROVE2P10155 KDM4B-208ENST00000589104 3470 ntTSL 213.9□□□□□ -0.182e-7■■■■□ 22.4
TROVE2P10155 AL355987.4-202ENST00000459985 1900 ntTSL 223.65■■□□□ 1.384e-7■■■■□ 22.1
TROVE2P10155 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.38e-9■■■■□ 22.1
TROVE2P10155 CPSF1-202ENST00000527827 619 ntTSL 219.55■□□□□ 0.728e-9■■■■□ 22.1
TROVE2P10155 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.538e-9■■■■□ 22.1
TROVE2P10155 VCP-203ENST00000448530 950 ntTSL 517.2■□□□□ 0.348e-9■■■■□ 22.1
TROVE2P10155 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.261e-12■■■■□ 22.1
TROVE2P10155 STXBP3-202ENST00000469338 294 ntTSL 216.09■□□□□ 0.178e-9■■■■□ 22.1
TROVE2P10155 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.168e-9■■■■□ 22.1
TROVE2P10155 STXBP3-204ENST00000483586 561 ntTSL 215.41■□□□□ 0.068e-9■■■■□ 22.1
TROVE2P10155 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.048e-9■■■■□ 22.1
TROVE2P10155 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.018e-9■■■■□ 22.1
TROVE2P10155 VCP-207ENST00000493886 2942 ntTSL 214.11□□□□□ -0.158e-9■■■■□ 22.1
TROVE2P10155 DOT1L-202ENST00000446286 376 ntTSL 313.8□□□□□ -0.28e-9■■■■□ 22.1
TROVE2P10155 CPSF1-205ENST00000531042 580 ntTSL 513.49□□□□□ -0.258e-9■■■■□ 22.1
TROVE2P10155 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC13.39□□□□□ -0.271e-12■■■■□ 22.1
TROVE2P10155 CAMK2N1-202ENST00000489020 812 ntTSL 311.15□□□□□ -0.628e-9■■■■□ 22.1
TROVE2P10155 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC10.77□□□□□ -0.698e-9■■■■□ 22.1
TROVE2P10155 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.838e-9■■■■□ 22.1
TROVE2P10155 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.278e-9■■■■□ 22.1
TROVE2P10155 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.388e-9■■■■□ 22.1
TROVE2P10155 DST-213ENST00000487754 2250 ntTSL 25.35□□□□□ -1.558e-9■■■■□ 22.1
TROVE2P10155 SH3BP1-202ENST00000417536 2858 ntTSL 219.53■□□□□ 0.723e-19■■■■□ 21.9
TROVE2P10155 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.713e-19■■■■□ 21.9
TROVE2P10155 SH3BP1-206ENST00000469947 2612 ntTSL 214.28□□□□□ -0.123e-19■■■■□ 21.9
TROVE2P10155 SH3BP1-203ENST00000451997 3123 ntTSL 213.3□□□□□ -0.283e-19■■■■□ 21.9
TROVE2P10155 Y_RNA.481-201ENST00000384373 102 ntBASIC0.84□□□□□ -2.272e-12■■■■□ 21.8
TROVE2P10155 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC14.16□□□□□ -0.141e-12■■■■□ 21.8
TROVE2P10155 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.281e-12■■■■□ 21.8
TROVE2P10155 KRIT1-205ENST00000412043 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.421e-12■■■■□ 21.8
TROVE2P10155 KRIT1-202ENST00000394503 2827 ntTSL 2 BASIC9.83□□□□□ -0.841e-12■■■■□ 21.8
TROVE2P10155 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.891e-12■■■■□ 21.8
TROVE2P10155 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.031e-12■■■■□ 21.8
TROVE2P10155 KRIT1-221ENST00000475770 2411 ntTSL 1 (best)8.56□□□□□ -1.041e-12■■■■□ 21.8
TROVE2P10155 KRIT1-222ENST00000486261 4057 ntTSL 1 (best)4.88□□□□□ -1.631e-12■■■■□ 21.8
TROVE2P10155 Y_RNA.186-201ENST00000363899 92 ntBASIC-2.87□□□□□ -2.871e-12■■■■□ 21.8
Retrieved 100 of 4,203 protein–RNA pairs in 155.2 ms