Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 ADE8YDR408C 645 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 PSY3YLR376C 729 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 SMM1YNR015W 1155 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 YSA1YBR111C 696 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 POP4YBR257W 840 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 YBR292CYBR292C 372 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 FCP1YMR277W 2199 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 YGR168CYGR168C 1131 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 APS2YJR058C 444 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 YJR084WYJR084W 1272 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 ATG29YPL166W 642 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 UBA3YPR066W 900 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 SNU66YOR308C 1764 nt6.86□□□□□ -1.31
TY1A-LR2P0CX72 SPS22YCL048W 1392 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 ERG24YNL280C 1317 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 PIB1YDR313C 861 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 KRE28YDR532C 1158 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 YGR012WYGR012W 1182 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 SBP1YHL034C 885 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 SEC65YML105C 822 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 SNN1YNL086W 309 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 EFM2YBR271W 1260 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 LRO1YNR008W 1986 nt6.85□□□□□ -1.31
TY1A-LR2P0CX72 YFL052WYFL052W 1398 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 TIF3YPR163C 1311 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 YER137CYER137C 447 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 YGL218WYGL218W 651 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 SPO16YHR153C 597 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 DAL2YIR029W 1032 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 YAP7YOL028C 738 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 RPN8YOR261C 1017 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 TIF5YPR041W 1218 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 YKR015CYKR015C 1707 nt6.84□□□□□ -1.31
TY1A-LR2P0CX72 YJR124CYJR124C 1347 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 PCL2YDL127W 927 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 BUD26YDR241W 288 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 RPL2AYFR031C-A 765 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 CTK2YJL006C 972 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 YJL055WYJL055W 738 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 ARG3YJL088W 1017 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 PSR1YLL010C 1284 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 PML1YLR016C 615 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 YLR030WYLR030W 792 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 SPO20YMR017W 1194 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 YPR160C-AYPR160C-A 285 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 MEP1YGR121C 1479 nt6.83□□□□□ -1.32
TY1A-LR2P0CX72 VHS1YDR247W 1386 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 PTM1YKL039W 1572 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 ADE17YMR120C 1779 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 ABD1YBR236C 1311 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 PAR32YDL173W 888 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 COG7YGL005C 840 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 YGL034CYGL034C 366 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 ARD1YHR013C 717 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 YNL140CYNL140C 570 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 MCT1YOR221C 1083 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 CKS1YBR135W 453 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 PRP9YDL030W 1593 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 GAL3YDR009W 1563 nt6.82□□□□□ -1.32
TY1A-LR2P0CX72 YCR025CYCR025C 411 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 NSE3YDR288W 912 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 RTT103YDR289C 1230 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 MAM3YOL060C 2121 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 YOL162WYOL162W 648 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 SEC24YIL109C 2781 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 YPK3YBR028C 1578 nt6.81□□□□□ -1.32
TY1A-LR2P0CX72 OCA4YCR095C 1089 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 GLY1YEL046C 1164 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 PPE1YHR075C 1203 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 YML094C-AYML094C-A 402 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 YMR007WYMR007W 381 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 ADE2YOR128C 1716 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 THI80YOR143C 960 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 SCP1YOR367W 603 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 PPS1YBR276C 2424 nt6.8□□□□□ -1.32
TY1A-LR2P0CX72 YDR124WYDR124W 975 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 HSP31YDR533C 714 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 YSC83YHR017W 1158 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 YJR096WYJR096W 849 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 YAL064WYAL064W 285 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 IDI1YPL117C 867 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 NUF2YOL069W 1356 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 YPR084WYPR084W 1371 nt6.79□□□□□ -1.32
TY1A-LR2P0CX72 PRB1YEL060C 1908 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 PDC5YLR134W 1692 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 TMS1YDR105C 1422 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 YBR056WYBR056W 1506 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 YFR020WYFR020W 699 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 YHR112CYHR112C 1137 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 YJL047C-AYJL047C-A 135 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 HAM1YJR069C 594 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 RDL1YOR285W 420 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 YNL247WYNL247W 2304 nt6.78□□□□□ -1.32
TY1A-LR2P0CX72 ARG7YMR062C 1326 nt6.77□□□□□ -1.32
TY1A-LR2P0CX72 BRL1YHR036W 1416 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 RMD1YDL001W 1293 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 HIM1YDR317W 1245 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 IRC7YFR055W 1023 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 SKI8YGL213C 1194 nt6.77□□□□□ -1.33
TY1A-LR2P0CX72 MND2YIR025W 1107 nt6.77□□□□□ -1.33
Retrieved 100 of 7,029 protein–RNA pairs in 26.6 ms