Protein–RNA interactions for Protein: P09234

SNRPC, U1 small nuclear ribonucleoprotein C, humanhuman

Known RBP Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP09234 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRPCP09234 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SNRPCP09234 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SNRPCP09234 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNRPCP09234 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRPCP09234 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRPCP09234 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNRPCP09234 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNRPCP09234 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNRPCP09234 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SNRPCP09234 AC020928.2-201ENST00000588717 2197 ntBASIC19.15■□□□□ 0.66
SNRPCP09234 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
SNRPCP09234 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRPCP09234 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRPCP09234 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNRPCP09234 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNRPCP09234 LINC00273-201ENST00000539813 1452 ntBASIC19.14■□□□□ 0.65
SNRPCP09234 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNRPCP09234 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNRPCP09234 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SNRPCP09234 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRPCP09234 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.11■□□□□ 0.65
SNRPCP09234 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRPCP09234 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRPCP09234 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.11■□□□□ 0.65
SNRPCP09234 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNRPCP09234 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.11■□□□□ 0.65
SNRPCP09234 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.11■□□□□ 0.65
SNRPCP09234 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 AP004609.3-201ENST00000610705 1884 ntBASIC19.1■□□□□ 0.65
SNRPCP09234 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.1■□□□□ 0.65
SNRPCP09234 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC19.1■□□□□ 0.65
SNRPCP09234 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 AC145676.1-201ENST00000514988 2004 ntBASIC19.1■□□□□ 0.65
SNRPCP09234 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SNRPCP09234 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRPCP09234 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRPCP09234 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
SNRPCP09234 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRPCP09234 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SNRPCP09234 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRPCP09234 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SNRPCP09234 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SNRPCP09234 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SNRPCP09234 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPCP09234 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPCP09234 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPCP09234 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPCP09234 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPCP09234 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPCP09234 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPCP09234 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPCP09234 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPCP09234 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SNRPCP09234 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRPCP09234 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.05■□□□□ 0.64
SNRPCP09234 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SNRPCP09234 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.05■□□□□ 0.64
SNRPCP09234 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPCP09234 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRPCP09234 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.04■□□□□ 0.64
SNRPCP09234 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPCP09234 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPCP09234 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC19.04■□□□□ 0.64
SNRPCP09234 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPCP09234 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPCP09234 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SNRPCP09234 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPCP09234 AC092803.2-201ENST00000564287 1899 ntBASIC19.03■□□□□ 0.64
SNRPCP09234 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.03■□□□□ 0.64
SNRPCP09234 LINC00543-201ENST00000567234 1845 ntBASIC19.03■□□□□ 0.64
SNRPCP09234 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPCP09234 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPCP09234 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SNRPCP09234 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPCP09234 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SNRPCP09234 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.02■□□□□ 0.64
SNRPCP09234 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SNRPCP09234 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNRPCP09234 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRPCP09234 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRPCP09234 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRPCP09234 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SNRPCP09234 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SNRPCP09234 MIR3665-201ENST00000578708 105 ntBASIC19.01■□□□□ 0.63
SNRPCP09234 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.01■□□□□ 0.63
SNRPCP09234 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.01■□□□□ 0.63
SNRPCP09234 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRPCP09234 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SNRPCP09234 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms