Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tuba1bP05213 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tuba1bP05213 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tuba1bP05213 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tuba1bP05213 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tuba1bP05213 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tuba1bP05213 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tuba1bP05213 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tuba1bP05213 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Tuba1bP05213 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tuba1bP05213 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tuba1bP05213 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tuba1bP05213 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tuba1bP05213 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tuba1bP05213 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Tuba1bP05213 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tuba1bP05213 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tuba1bP05213 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tuba1bP05213 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tuba1bP05213 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Tuba1bP05213 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tuba1bP05213 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Tuba1bP05213 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tuba1bP05213 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tuba1bP05213 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tuba1bP05213 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tuba1bP05213 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.51■□□□□ 0.87
Tuba1bP05213 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tuba1bP05213 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tuba1bP05213 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tuba1bP05213 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.5■□□□□ 0.87
Tuba1bP05213 Particl-201ENSMUST00000205370 1560 ntBASIC20.5■□□□□ 0.87
Tuba1bP05213 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tuba1bP05213 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tuba1bP05213 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Tuba1bP05213 Gm7432-201ENSMUST00000210343 879 ntBASIC20.49■□□□□ 0.87
Tuba1bP05213 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Tuba1bP05213 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tuba1bP05213 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.48■□□□□ 0.87
Tuba1bP05213 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.48■□□□□ 0.87
Tuba1bP05213 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tuba1bP05213 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tuba1bP05213 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tuba1bP05213 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tuba1bP05213 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.47■□□□□ 0.87
Tuba1bP05213 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
Tuba1bP05213 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tuba1bP05213 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tuba1bP05213 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tuba1bP05213 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Tuba1bP05213 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Tuba1bP05213 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tuba1bP05213 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tuba1bP05213 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.45■□□□□ 0.86
Tuba1bP05213 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tuba1bP05213 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tuba1bP05213 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Tuba1bP05213 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tuba1bP05213 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tuba1bP05213 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tuba1bP05213 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tuba1bP05213 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Tuba1bP05213 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.44■□□□□ 0.86
Tuba1bP05213 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Tuba1bP05213 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tuba1bP05213 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.43■□□□□ 0.86
Tuba1bP05213 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tuba1bP05213 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.43■□□□□ 0.86
Tuba1bP05213 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tuba1bP05213 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tuba1bP05213 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tuba1bP05213 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tuba1bP05213 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tuba1bP05213 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tuba1bP05213 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tuba1bP05213 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tuba1bP05213 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tuba1bP05213 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tuba1bP05213 Gm11599-201ENSMUST00000118720 878 ntBASIC20.4■□□□□ 0.86
Tuba1bP05213 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.4■□□□□ 0.86
Tuba1bP05213 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Tuba1bP05213 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.4■□□□□ 0.86
Tuba1bP05213 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tuba1bP05213 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Tuba1bP05213 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Tuba1bP05213 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tuba1bP05213 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tuba1bP05213 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.39■□□□□ 0.85
Tuba1bP05213 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tuba1bP05213 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tuba1bP05213 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tuba1bP05213 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tuba1bP05213 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tuba1bP05213 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms