Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
P04940 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04940 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
P04940 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
P04940 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.2■□□□□ 0.5
P04940 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04940 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
P04940 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04940 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
P04940 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
P04940 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04940 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04940 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P04940 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P04940 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.17■□□□□ 0.5
P04940 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.17■□□□□ 0.5
P04940 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
P04940 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P04940 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.17■□□□□ 0.5
P04940 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04940 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
P04940 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.16■□□□□ 0.5
P04940 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
P04940 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04940 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
P04940 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
P04940 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P04940 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
P04940 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC18.15■□□□□ 0.5
P04940 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P04940 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
P04940 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P04940 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P04940 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P04940 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
P04940 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.13■□□□□ 0.49
P04940 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.13■□□□□ 0.49
P04940 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.13■□□□□ 0.49
P04940 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
P04940 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04940 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
P04940 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P04940 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04940 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04940 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
P04940 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.11■□□□□ 0.49
P04940 Gm9806-201ENSMUST00000051080 552 ntBASIC18.11■□□□□ 0.49
P04940 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
P04940 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
P04940 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04940 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04940 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
P04940 Scarna2-201ENSMUST00000157560 414 ntBASIC18.1■□□□□ 0.49
P04940 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04940 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P04940 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04940 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
P04940 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.09■□□□□ 0.49
P04940 Gm44428-201ENSMUST00000204474 874 ntBASIC18.09■□□□□ 0.49
P04940 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04940 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
P04940 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
P04940 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.08■□□□□ 0.49
P04940 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
P04940 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04940 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04940 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
P04940 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
P04940 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.07■□□□□ 0.48
P04940 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
P04940 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
P04940 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04940 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
P04940 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
P04940 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04940 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.05■□□□□ 0.48
P04940 Gm16437-201ENSMUST00000025669 507 ntBASIC18.05■□□□□ 0.48
P04940 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04940 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
P04940 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms