Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd74P04441 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cd74P04441 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd74P04441 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd74P04441 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cd74P04441 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd74P04441 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd74P04441 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd74P04441 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cd74P04441 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd74P04441 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cd74P04441 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cd74P04441 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cd74P04441 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.52■□□□□ 0.56
Cd74P04441 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cd74P04441 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd74P04441 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cd74P04441 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd74P04441 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd74P04441 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.51■□□□□ 0.55
Cd74P04441 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.51■□□□□ 0.55
Cd74P04441 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Cd74P04441 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cd74P04441 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.5■□□□□ 0.55
Cd74P04441 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd74P04441 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Cd74P04441 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd74P04441 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd74P04441 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cd74P04441 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cd74P04441 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd74P04441 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd74P04441 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cd74P04441 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cd74P04441 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.49■□□□□ 0.55
Cd74P04441 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd74P04441 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.48■□□□□ 0.55
Cd74P04441 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd74P04441 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd74P04441 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd74P04441 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cd74P04441 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.47■□□□□ 0.55
Cd74P04441 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd74P04441 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd74P04441 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd74P04441 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cd74P04441 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.47■□□□□ 0.55
Cd74P04441 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd74P04441 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cd74P04441 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd74P04441 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd74P04441 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cd74P04441 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.46■□□□□ 0.55
Cd74P04441 Gm9812-201ENSMUST00000061934 968 ntBASIC18.46■□□□□ 0.55
Cd74P04441 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Cd74P04441 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Cd74P04441 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cd74P04441 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cd74P04441 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
Cd74P04441 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.45■□□□□ 0.54
Cd74P04441 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.45■□□□□ 0.54
Cd74P04441 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd74P04441 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd74P04441 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cd74P04441 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd74P04441 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd74P04441 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd74P04441 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cd74P04441 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd74P04441 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Cd74P04441 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd74P04441 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cd74P04441 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.43■□□□□ 0.54
Cd74P04441 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd74P04441 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cd74P04441 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cd74P04441 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.43■□□□□ 0.54
Cd74P04441 Gm12366-201ENSMUST00000121722 873 ntBASIC18.43■□□□□ 0.54
Cd74P04441 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.43■□□□□ 0.54
Cd74P04441 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.43■□□□□ 0.54
Cd74P04441 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd74P04441 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.43■□□□□ 0.54
Cd74P04441 Gm5786-201ENSMUST00000085368 882 ntBASIC18.43■□□□□ 0.54
Cd74P04441 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cd74P04441 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cd74P04441 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cd74P04441 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd74P04441 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd74P04441 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd74P04441 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd74P04441 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.42■□□□□ 0.54
Cd74P04441 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.42■□□□□ 0.54
Cd74P04441 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.42■□□□□ 0.54
Cd74P04441 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.42■□□□□ 0.54
Cd74P04441 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Cd74P04441 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cd74P04441 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Cd74P04441 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd74P04441 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cd74P04441 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms