Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GAPDHP04406 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GAPDHP04406 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
GAPDHP04406 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
GAPDHP04406 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
GAPDHP04406 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
GAPDHP04406 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GAPDHP04406 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GAPDHP04406 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.41■□□□□ 0.86
GAPDHP04406 MIR7108-201ENST00000614319 87 ntBASIC20.41■□□□□ 0.86
GAPDHP04406 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
GAPDHP04406 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GAPDHP04406 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
GAPDHP04406 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
GAPDHP04406 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
GAPDHP04406 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.4■□□□□ 0.86
GAPDHP04406 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
GAPDHP04406 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.4■□□□□ 0.86
GAPDHP04406 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
GAPDHP04406 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
GAPDHP04406 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GAPDHP04406 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.39■□□□□ 0.86
GAPDHP04406 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.39■□□□□ 0.86
GAPDHP04406 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
GAPDHP04406 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
GAPDHP04406 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GAPDHP04406 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
GAPDHP04406 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GAPDHP04406 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
GAPDHP04406 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GAPDHP04406 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GAPDHP04406 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.38■□□□□ 0.85
GAPDHP04406 AC008813.1-201ENST00000536597 885 ntBASIC20.38■□□□□ 0.85
GAPDHP04406 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GAPDHP04406 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAPDHP04406 DUSP8P4-201ENST00000399538 1761 ntBASIC20.37■□□□□ 0.85
GAPDHP04406 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
GAPDHP04406 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAPDHP04406 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.37■□□□□ 0.85
GAPDHP04406 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
GAPDHP04406 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.37■□□□□ 0.85
GAPDHP04406 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
GAPDHP04406 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAPDHP04406 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAPDHP04406 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
GAPDHP04406 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.36■□□□□ 0.85
GAPDHP04406 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.36■□□□□ 0.85
GAPDHP04406 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GAPDHP04406 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GAPDHP04406 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GAPDHP04406 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
GAPDHP04406 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
GAPDHP04406 MIR3648-2-201ENST00000581792 180 ntBASIC20.35■□□□□ 0.85
GAPDHP04406 MIR3648-1-201ENST00000615959 180 ntBASIC20.35■□□□□ 0.85
GAPDHP04406 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GAPDHP04406 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GAPDHP04406 CR559946.2-201ENST00000623684 991 ntBASIC20.34■□□□□ 0.85
GAPDHP04406 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAPDHP04406 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GAPDHP04406 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
GAPDHP04406 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAPDHP04406 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
GAPDHP04406 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAPDHP04406 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.33■□□□□ 0.85
GAPDHP04406 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GAPDHP04406 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GAPDHP04406 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GAPDHP04406 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.33■□□□□ 0.85
GAPDHP04406 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GAPDHP04406 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GAPDHP04406 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
GAPDHP04406 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAPDHP04406 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAPDHP04406 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAPDHP04406 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAPDHP04406 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GAPDHP04406 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GAPDHP04406 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
GAPDHP04406 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAPDHP04406 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GAPDHP04406 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.31■□□□□ 0.84
GAPDHP04406 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GAPDHP04406 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GAPDHP04406 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GAPDHP04406 AC016575.1-201ENST00000607026 382 ntBASIC20.3■□□□□ 0.84
GAPDHP04406 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.29■□□□□ 0.84
GAPDHP04406 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GAPDHP04406 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GAPDHP04406 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GAPDHP04406 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GAPDHP04406 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GAPDHP04406 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.28■□□□□ 0.84
GAPDHP04406 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GAPDHP04406 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GAPDHP04406 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAPDHP04406 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAPDHP04406 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.27■□□□□ 0.84
GAPDHP04406 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.27■□□□□ 0.84
GAPDHP04406 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GAPDHP04406 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms