Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
P03980 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P03980 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.22■□□□□ 0.35
P03980 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.22■□□□□ 0.35
P03980 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
P03980 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
P03980 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
P03980 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
P03980 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.21■□□□□ 0.35
P03980 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
P03980 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.21■□□□□ 0.34
P03980 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
P03980 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P03980 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
P03980 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P03980 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
P03980 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.2■□□□□ 0.34
P03980 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
P03980 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
P03980 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P03980 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
P03980 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
P03980 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
P03980 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
P03980 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
P03980 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P03980 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P03980 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P03980 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P03980 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
P03980 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P03980 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
P03980 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
P03980 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P03980 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P03980 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.17■□□□□ 0.34
P03980 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P03980 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P03980 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P03980 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P03980 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.16■□□□□ 0.34
P03980 Nkain2-201ENSMUST00000092602 558 ntBASIC17.16■□□□□ 0.34
P03980 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.16■□□□□ 0.34
P03980 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.16■□□□□ 0.34
P03980 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P03980 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.15■□□□□ 0.34
P03980 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P03980 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P03980 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.14■□□□□ 0.33
P03980 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
P03980 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
P03980 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P03980 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
P03980 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P03980 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P03980 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P03980 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P03980 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P03980 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P03980 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P03980 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P03980 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P03980 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.11■□□□□ 0.33
P03980 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P03980 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P03980 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P03980 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P03980 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P03980 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P03980 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P03980 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P03980 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P03980 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P03980 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P03980 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P03980 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
P03980 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P03980 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P03980 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P03980 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P03980 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P03980 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P03980 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.07■□□□□ 0.32
P03980 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC17.07■□□□□ 0.32
P03980 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P03980 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
P03980 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P03980 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P03980 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
P03980 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
P03980 Gm42809-201ENSMUST00000198429 1138 ntBASIC17.06■□□□□ 0.32
P03980 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms