Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Hbb-b1P02088 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
Hbb-b1P02088 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hbb-b1P02088 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hbb-b1P02088 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hbb-b1P02088 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Hbb-b1P02088 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Hbb-b1P02088 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Hbb-b1P02088 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Hbb-b1P02088 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.83■□□□□ 0.13
Hbb-b1P02088 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hbb-b1P02088 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hbb-b1P02088 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Hbb-b1P02088 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hbb-b1P02088 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Hbb-b1P02088 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Hbb-b1P02088 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Hbb-b1P02088 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Hbb-b1P02088 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Hbb-b1P02088 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Hbb-b1P02088 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Hbb-b1P02088 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hbb-b1P02088 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Hbb-b1P02088 Particl-201ENSMUST00000205370 1560 ntBASIC15.78■□□□□ 0.12
Hbb-b1P02088 Gm37847-201ENSMUST00000192163 1497 ntBASIC15.78■□□□□ 0.12
Hbb-b1P02088 Gm31748-201ENSMUST00000194938 1497 ntBASIC15.78■□□□□ 0.12
Hbb-b1P02088 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hbb-b1P02088 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.77■□□□□ 0.12
Hbb-b1P02088 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Hbb-b1P02088 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Hbb-b1P02088 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Hbb-b1P02088 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Hbb-b1P02088 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.77■□□□□ 0.11
Hbb-b1P02088 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Hbb-b1P02088 Gm32051-202ENSMUST00000197905 2385 ntBASIC15.76■□□□□ 0.11
Hbb-b1P02088 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Hbb-b1P02088 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hbb-b1P02088 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Hbb-b1P02088 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Hbb-b1P02088 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hbb-b1P02088 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Hbb-b1P02088 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hbb-b1P02088 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hbb-b1P02088 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Hbb-b1P02088 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Hbb-b1P02088 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hbb-b1P02088 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Hbb-b1P02088 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hbb-b1P02088 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hbb-b1P02088 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hbb-b1P02088 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hbb-b1P02088 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Hbb-b1P02088 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.72■□□□□ 0.11
Hbb-b1P02088 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hbb-b1P02088 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hbb-b1P02088 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hbb-b1P02088 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.71■□□□□ 0.11
Hbb-b1P02088 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hbb-b1P02088 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hbb-b1P02088 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hbb-b1P02088 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hbb-b1P02088 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hbb-b1P02088 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Hbb-b1P02088 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hbb-b1P02088 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hbb-b1P02088 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Hbb-b1P02088 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hbb-b1P02088 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hbb-b1P02088 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms