Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Syn1O88935 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.35■■□□□ 1.33
Syn1O88935 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.35■■□□□ 1.33
Syn1O88935 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Syn1O88935 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.34■■□□□ 1.33
Syn1O88935 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Syn1O88935 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Syn1O88935 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Syn1O88935 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Syn1O88935 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Syn1O88935 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Syn1O88935 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Syn1O88935 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.32■■□□□ 1.32
Syn1O88935 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Syn1O88935 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Syn1O88935 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.32■■□□□ 1.32
Syn1O88935 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Syn1O88935 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Syn1O88935 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Syn1O88935 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
Syn1O88935 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Syn1O88935 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.31■■□□□ 1.32
Syn1O88935 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Syn1O88935 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Syn1O88935 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Syn1O88935 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Syn1O88935 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Syn1O88935 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Syn1O88935 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.3■■□□□ 1.32
Syn1O88935 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.3■■□□□ 1.32
Syn1O88935 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Syn1O88935 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Syn1O88935 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.29■■□□□ 1.32
Syn1O88935 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.29■■□□□ 1.32
Syn1O88935 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Syn1O88935 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Syn1O88935 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Syn1O88935 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Syn1O88935 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Syn1O88935 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Syn1O88935 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Syn1O88935 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Syn1O88935 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Syn1O88935 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Syn1O88935 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Syn1O88935 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Syn1O88935 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Syn1O88935 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.26■■□□□ 1.31
Syn1O88935 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
Syn1O88935 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Syn1O88935 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Syn1O88935 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.25■■□□□ 1.31
Syn1O88935 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Syn1O88935 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Syn1O88935 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Syn1O88935 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC23.24■■□□□ 1.31
Syn1O88935 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Syn1O88935 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Syn1O88935 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Syn1O88935 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Syn1O88935 Gm5131-201ENSMUST00000212776 1238 ntBASIC23.23■■□□□ 1.31
Syn1O88935 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Syn1O88935 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Syn1O88935 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Syn1O88935 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Syn1O88935 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Syn1O88935 Gm9847-201ENSMUST00000052528 599 ntBASIC23.21■■□□□ 1.31
Syn1O88935 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Syn1O88935 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Syn1O88935 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Syn1O88935 Gm21956-201ENSMUST00000179946 522 ntBASIC23.2■■□□□ 1.3
Syn1O88935 Gm7417-201ENSMUST00000192950 473 ntBASIC23.2■■□□□ 1.3
Syn1O88935 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.19■■□□□ 1.3
Syn1O88935 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Syn1O88935 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC23.18■■□□□ 1.3
Syn1O88935 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Syn1O88935 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Syn1O88935 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Syn1O88935 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Syn1O88935 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.15■■□□□ 1.3
Syn1O88935 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Syn1O88935 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.15■■□□□ 1.3
Syn1O88935 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.15■■□□□ 1.3
Syn1O88935 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Syn1O88935 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Syn1O88935 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.14■■□□□ 1.29
Syn1O88935 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.14■■□□□ 1.29
Syn1O88935 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Syn1O88935 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.13■■□□□ 1.29
Syn1O88935 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.13■■□□□ 1.29
Syn1O88935 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.13■■□□□ 1.29
Syn1O88935 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Syn1O88935 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.12■■□□□ 1.29
Syn1O88935 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.12■■□□□ 1.29
Syn1O88935 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Syn1O88935 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Syn1O88935 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Syn1O88935 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Syn1O88935 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.11■■□□□ 1.29
Syn1O88935 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms