Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops3O88543 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cops3O88543 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cops3O88543 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cops3O88543 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Cops3O88543 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cops3O88543 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Gm6821-201ENSMUST00000107540 542 ntBASIC19.86■□□□□ 0.77
Cops3O88543 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Cops3O88543 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cops3O88543 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cops3O88543 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops3O88543 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cops3O88543 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cops3O88543 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.84■□□□□ 0.77
Cops3O88543 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cops3O88543 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cops3O88543 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cops3O88543 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.83■□□□□ 0.77
Cops3O88543 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cops3O88543 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cops3O88543 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops3O88543 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cops3O88543 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cops3O88543 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops3O88543 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops3O88543 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cops3O88543 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cops3O88543 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.8■□□□□ 0.76
Cops3O88543 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cops3O88543 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops3O88543 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cops3O88543 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cops3O88543 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cops3O88543 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cops3O88543 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.77■□□□□ 0.75
Cops3O88543 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cops3O88543 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops3O88543 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cops3O88543 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cops3O88543 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.76■□□□□ 0.75
Cops3O88543 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.76■□□□□ 0.75
Cops3O88543 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cops3O88543 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.75■□□□□ 0.75
Cops3O88543 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.75■□□□□ 0.75
Cops3O88543 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cops3O88543 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.74■□□□□ 0.75
Cops3O88543 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cops3O88543 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cops3O88543 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cops3O88543 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.73■□□□□ 0.75
Cops3O88543 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.73■□□□□ 0.75
Cops3O88543 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.73■□□□□ 0.75
Cops3O88543 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cops3O88543 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cops3O88543 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.72■□□□□ 0.75
Cops3O88543 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Cops3O88543 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.72■□□□□ 0.75
Cops3O88543 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.72■□□□□ 0.75
Cops3O88543 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Cops3O88543 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cops3O88543 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms